RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF620Q6ZNG0 422 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 PTCHD4Q6ZW05 846 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 SYT9Q86SS6 491 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 PATL1Q86TB9 770 aaKnown RBP7.94□□□□□ -1.14
MCF2L-223ENST00000473345 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 NPEPL1Q8NDH3 523 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 OR8B3Q8NGG8 313 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 PTP4A1Q93096 173 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 RASD2Q96D21 266 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 BPIFA2Q96DR5 249 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF583Q96ND8 569 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 OR8B2Q96RD0 313 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 SH3GL1Q99961 368 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 NOX4Q9NPH5 578 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 UFSP2Q9NUQ7 469 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 VSX1Q9NZR4 365 aaPredicted RBP7.94□□□□□ -1.14
MCF2L-223ENST00000473345 STX18Q9P2W9 335 aaKnown RBP7.94□□□□□ -1.14
MCF2L-223ENST00000473345 NDRG4Q9ULP0 352 aaKnown RBP7.94□□□□□ -1.14
MCF2L-223ENST00000473345 AP3M1Q9Y2T2 418 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 SIGLEC9Q9Y336 463 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 MED31Q9Y3C7 131 aa7.94□□□□□ -1.14
MCF2L-223ENST00000473345 HTR3EA5X5Y0 456 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 C12orf71A8MTZ7 269 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 IQCF6A8MYZ5 107 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF879B4DU55 563 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 FSTL3O95633 263 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 PSKH1P11801 424 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 NR2C1P13056 603 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 TNFSF4P23510 183 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 GATA4P43694 442 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ACTR3P61158 418 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 PCBD1P61457 104 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 HIST1H3AP68431 136 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 MS4A2Q01362 244 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 POU4F2Q12837 409 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 COX10Q12887 443 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF181Q2M3W8 571 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 KRTAP27-1Q3LI81 207 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 HIST2H3PS2Q5TEC6 136 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 GPR157Q5UAW9 335 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 CORO6Q6QEF8 472 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 COLCA1Q6ZS62 124 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 HIST2H3AQ71DI3 136 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ZER1Q7Z7L7 766 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 LDLRAD3Q86YD5 345 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 NRMQ8IXM6 262 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 PNKDQ8N490 385 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 TMEM86BQ8N661 226 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ZSCAN4Q8NAM6 433 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-223ENST00000473345 OR1F12Q8NHA8 337 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 RASSF5Q8WWW0 418 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 DYRK2Q92630 601 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 LHX4Q969G2 390 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ASB9Q96DX5 294 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 WDFY2Q96P53 400 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 TSSK2Q96PF2 358 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 RBP7Q96R05 134 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 TCF7L1Q9HCS4 588 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 ADA2Q9NZK5 511 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 CLN8Q9UBY8 286 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-223ENST00000473345 LHFPL6Q9Y693 200 aa7.93□□□□□ -1.14
MCF2L-223ENST00000473345 KMT2CQ8NEZ4 4911 aaKnown RBP7.93□□□□□ -1.14
MCF2L-223ENST00000473345 DNAH3Q8TD57 4116 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 A0A087WUU8 490 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 IGHV1-69DA0A0B4J2H0 117 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 TEX13CA0A0J9YWL9 993 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 PHYHO14832 338 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 TIMM23O14925 209 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 TOX4O94842 621 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 IGHV1-69P01742 117 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 CRYBA1P05813 215 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 GPR4P46093 362 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 SLC9A3P48764 834 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 GSK3BP49841 420 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 LIPEQ05469 1076 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 ARL9Q6T311 187 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 CFAP77Q6ZQR2 320 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 DCDC5Q6ZRR9 648 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF826PQ6ZT77 177 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 VTCN1Q7Z7D3 282 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 OR13G1Q8NGZ3 307 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 Q8TCH9 128 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 SSMEM1Q8WWF3 244 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 UBE2FQ969M7 185 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 SEH1LQ96EE3 360 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 DUS3LQ96G46 650 aaKnown RBP7.92□□□□□ -1.14
MCF2L-223ENST00000473345 POLR2J2Q9GZM3 115 aaKnown RBP7.92□□□□□ -1.14
MCF2L-223ENST00000473345 POLR2J3Q9H1A7 115 aaKnown RBP7.92□□□□□ -1.14
MCF2L-223ENST00000473345 SYT4Q9H2B2 425 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 MUC13Q9H3R2 512 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 ACOXLQ9NUZ1 547 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 POMT1Q9Y6A1 747 aa7.92□□□□□ -1.14
MCF2L-223ENST00000473345 ZNF816-ZNF321PA0A0X1KG74 233 aa7.91□□□□□ -1.14
MCF2L-223ENST00000473345 PRSS37A4D1T9 235 aa7.91□□□□□ -1.14
MCF2L-223ENST00000473345 FAM220BPB1ANY3 271 aa7.91□□□□□ -1.14
MCF2L-223ENST00000473345 P2RY10O00398 339 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms