RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 UBAP1Q9NZ09 502 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 PPP1R3CQ9UQK1 317 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
MRPL55-226ENST00000473066 NPTNQ9Y639 398 aa13.21□□□□□ -0.29
MRPL55-226ENST00000473066 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 IFNL4K9M1U5 179 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 IGHV2-5P01817 119 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 RAD23AP54725 363 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 BNIP1Q12981 228 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF362Q5T0B9 420 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-226ENST00000473066 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 PGAP1Q75T13 922 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-226ENST00000473066 ERI1Q8IV48 349 aaKnown RBP13.2□□□□□ -0.3
MRPL55-226ENST00000473066 SPICQ8N5J4 248 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 TEX29Q8N6K0 151 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF511Q8NB15 262 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 SPRYD4Q8WW59 207 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-226ENST00000473066 DNAJC9Q8WXX5 260 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 SLAMF6Q96DU3 332 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 INTS14Q96SY0 518 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 NMNAT2Q9BZQ4 307 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
MRPL55-226ENST00000473066 PCDHB10Q9UN67 800 aa13.2□□□□□ -0.3
MRPL55-226ENST00000473066 DOCK11Q5JSL3 2073 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 PRR23D1E9PI22 279 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF593O00488 134 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 GSC2O15499 205 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 HMGN1P05114 100 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 PRR23D2P0DMB1 279 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 CLUP10909 449 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 OSMP13725 252 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 HSD11B1P28845 292 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 SLC15A1P46059 708 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 GRB2P62993 217 aaKnown RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 EIF2B1Q14232 305 aaKnown RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 GINS1Q14691 196 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 ZNRF4Q8WWF5 429 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
MRPL55-226ENST00000473066 MED20Q9H944 212 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
MRPL55-226ENST00000473066 A0A0G2JMP0 313 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 A0A0X1KG70 313 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 GLCEO94923 617 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SBK2P0C263 348 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 GSTT1P30711 240 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 PRKXP51817 358 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 GK2Q14410 553 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-226ENST00000473066 RSPO1Q2MKA7 263 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 TEX30Q5JUR7 227 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 CXXC5Q7LFL8 322 aaKnown RBP13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SHFQ7M4L6 423 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 KLHL36Q8N4N3 616 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 PAPD5Q8NDF8 572 aaKnown RBP13.18□□□□□ -0.3
MRPL55-226ENST00000473066 OR4M2Q8NGB6 313 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 OR10S1Q8NGN2 331 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SLCO4A1Q96BD0 722 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 NRBF2Q96F24 287 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 MEGF10Q96KG7 1140 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SLC30A2Q9BRI3 323 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 OR51V1Q9H2C8 321 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 SP140LQ9H930 580 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 N6AMT1Q9Y5N5 214 aa13.18□□□□□ -0.3
MRPL55-226ENST00000473066 LRRC30A6NM36 301 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PHF1O43189 567 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-226ENST00000473066 XRCC2O43543 280 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 TIPRLO75663 272 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 CIB2O75838 187 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PNPP00491 289 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 IGHV2-70P01814 119 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 APOC1P02654 83 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 IRF2P14316 349 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 OTX1P32242 354 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-226ENST00000473066 THBS2P35442 1172 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 MMP16P51512 607 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PRSS12P56730 875 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 RPS7P62081 194 aaKnown RBP13.17□□□□□ -0.3
MRPL55-226ENST00000473066 BTG1P62324 171 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PCK2Q16822 640 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 KLHL12Q53G59 568 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PLBD1Q6P4A8 553 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 DPY19L4Q7Z388 723 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms