RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 RSPO1Q2MKA7 263 aaPredicted RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 LINC00303Q3SY05 128 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 ZNF585AQ6P3V2 769 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 ANKRD16Q6P6B7 361 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 METAP1DQ6UB28 335 aaPredicted RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 FAM57BQ71RH2 274 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 DOK3Q7L591 496 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 LUZP2Q86TE4 346 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 LRRC28Q86X40 367 aaPredicted RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 GCNT2Q8N0V5 402 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 NKAIN3Q8N8D7 197 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 PLPP7Q8NBV4 271 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 OR52H1Q8NGJ2 320 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 OR1K1Q8NGR3 316 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 FAM57AQ8TBR7 257 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 TRMT10AQ8TBZ6 339 aaKnown RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 OR51E1Q8TCB6 317 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 PGAM5Q96HS1 289 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 DIRAS2Q96HU8 199 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 CMTM3Q96MX0 182 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 ZFP3Q96NJ6 502 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SLX1AQ9BQ83 275 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SP140LQ9H930 580 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 GPR84Q9NQS5 396 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 ZNF275Q9NSD4 429 aaPredicted RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 TAS2R4Q9NYW5 299 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 C1QTNF9BB2RNN3 333 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 H3BSH0 61 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNHIT1O43257 154 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 UPK1BO75841 260 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 UBL3O95164 117 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 TPOP07202 933 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ITGA5P08648 1049 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 HOXD4P09016 255 aaPredicted RBP8.19□□□□□ -1.1
VPS52-216ENST00000471309 DBHP09172 617 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 FAM87AP0C7U9 286 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 C1QTNF9P0C862 333 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CALCBP10092 127 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CD37P11049 281 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF20P17024 532 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 COX5AP20674 150 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ANOS1P23352 680 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 KIR2DL2P43627 348 aaPredicted RBP8.19□□□□□ -1.1
VPS52-216ENST00000471309 FOXG1P55316 489 aaPredicted RBP8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF181Q2M3W8 571 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 PABPC1L2AQ5JQF8 200 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 SFRP5Q5T4F7 317 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 C1orf185Q5T7R7 199 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 HES5Q5TA89 166 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 C9orf135Q5VTT2 229 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF529Q6P280 563 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 TMEM53Q6P2H8 277 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CNIH2Q6PI25 160 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 UNQ6494/PRO21346Q6UXR6 183 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 Q6ZSR3 168 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 Q6ZT83 130 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 COMMD2Q86X83 199 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 SERPINA12Q8IW75 414 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF433Q8N7K0 673 aaPredicted RBP8.19□□□□□ -1.1
VPS52-216ENST00000471309 SAMD12Q8N8I0 201 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 OR1J2Q8NGS2 313 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 AKR7LQ8NHP1 331 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 FGFBP3Q8TAT2 258 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 LGALS14Q8TCE9 139 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 SLC7A6Q92536 515 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 BOD1Q96IK1 185 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 OR10A2Q9H208 303 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF71Q9NQZ8 489 aaPredicted RBP8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF319Q9P2F9 582 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ZNF391Q9UJN7 358 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 SPATA2Q9UM82 520 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 FAM215AQ9Y5M1 114 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 ETV7Q9Y603 341 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CNTRLQ7Z7A1 2325 aa8.19□□□□□ -1.1
VPS52-216ENST00000471309 CHD8Q9HCK8 2581 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 CFAP47Q6ZTR5 3102 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 A0A096LPE4 126 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 LOC390937A0A1W2PQ73 354 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ZNF503-AS2A6NEH8 195 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 FABP12A6NFH5 140 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 DHRS7CA6NNS2 312 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 E9PLN8 166 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 TBX1O43435 398 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 LMX1BO60663 402 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 TNFSF13O75888 250 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 DHRS3O75911 302 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 HLA-HP01893 362 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 APOA1P02647 267 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 MAS1P04201 325 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 EIF4EP06730 217 aaKnown RBP8.18□□□□□ -1.1
VPS52-216ENST00000471309 PATE4P0C8F1 98 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ABOP16442 354 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 ELK1P19419 428 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 TALDO1P37837 337 aa8.18□□□□□ -1.1
VPS52-216ENST00000471309 DDOSTP39656 456 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms