RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SLC7A6Q92536 515 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 NEUROG1Q92886 237 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 HAVCR1Q96D42 359 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 TRMT61AQ96FX7 289 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 CCL19Q99731 98 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 TRAF4Q9BUZ4 470 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 OR10A2Q9H208 303 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 MOB1AQ9H8S9 216 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF701Q9NV72 531 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
SPTLC1-204ENST00000469778 TMEM269A0A1B0GVZ9 245 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 H7C417 338 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 XRCC2O43543 280 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 ATE1O95260 518 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 CD8AP01732 235 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 CCDC159P0C7I6 412 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 PSKH1P11801 424 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 CD53P19397 219 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 KITLGP21583 273 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 DDOSTP39656 456 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 CX3CR1P49238 355 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 PRKXP51817 358 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 HCCSP53701 268 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 KRTAP10-9P60411 292 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 PSMA6P60900 246 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 GALEQ14376 348 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 MST1LQ2TV78 715 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 C6orf141Q5SZD1 244 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 ZNF684Q5T5D7 378 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 VHLLQ6RSH7 139 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 FAM220AQ7Z4H9 259 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 CNIH3Q8TBE1 160 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 SLC25A40Q8TBP6 338 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 TMEM80Q96HE8 168 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 AMELYQ99218 206 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 OR2J1Q9GZK6 312 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 DUSP13Q9UII6 198 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 IKZF2Q9UKS7 526 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 DIMT1Q9UNQ2 313 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 LAMP3Q9UQV4 416 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 KLHDC2Q9Y2U9 406 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 STARD10Q9Y365 291 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 NOP16Q9Y3C1 178 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 TPRKBQ9Y3C4 175 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 LRP12Q9Y561 859 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 SNX5Q9Y5X3 404 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 APCP25054 2843 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 RTTNQ86VV8 2226 aa10.85□□□□□ -0.67
SPTLC1-204ENST00000469778 SPG11Q96JI7 2443 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 A0A0U1RQV5 110 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 PLSCR5A0PG75 271 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 GPRIN2O60269 458 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 SOD3P08294 240 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 ATP6V1B1P15313 513 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 MYL12AP19105 171 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 PPOXP50336 477 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 PCGF3Q3KNV8 242 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 RNLSQ5VYX0 342 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 C11orf71Q6IPW1 123 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 FDX2Q6P4F2 183 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 LRRN1Q6UXK5 716 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 TMPRSS11AQ6ZMR5 421 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 RFPL4BQ6ZWI9 263 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 PRSS45Q7RTY3 260 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 CDH24Q86UP0 819 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 RAB1BQ9H0U4 201 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 AMBNQ9NP70 447 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 ERVK13-1Q9NX77 482 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 NKIRAS2Q9NYR9 191 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 PSORS1C1Q9UIG5 152 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 BLOC1S6Q9UL45 172 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 ZDHHC8Q9ULC8 765 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 R4GMQ9 66 aa10.84□□□□□ -0.67
SPTLC1-204ENST00000469778 ABCA12Q86UK0 2595 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 CACNA1DQ01668 2161 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 A0A1W2PPW3 197 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 TMEM129A0AVI4 362 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 M0R233 179 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 FAM20BO75063 409 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 ANXA2P07355 339 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 ZNF121P58317 390 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 ZNF85Q03923 595 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 SMN1Q16637 294 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 RBM48Q5RL73 367 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 LIPNQ5VXI9 398 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms