RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 M0R135 149 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 TCF21O43680 179 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 CST1P01037 141 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 LCATP04180 440 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 GYPBP06028 91 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 SBK2P0C263 348 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 SELEP16581 610 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 SPI1P17947 270 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 OTX1P32242 354 aaPredicted RBP15.94■□□□□ 0.14
COL5A1-203ENST00000460264 TPTEP56180 551 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 PRSS12P56730 875 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 BTG1P62324 171 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 ZMYND11Q15326 602 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 TMEM155Q4W5P6 130 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 AQP12AQ8IXF9 295 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 SPICQ8N5J4 248 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 GIPC3Q8TF64 312 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 CANT1Q8WVQ1 401 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 SPTSSAQ969W0 71 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF799Q96GE5 643 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 FEVQ99581 238 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 C19orf24Q9BVV8 132 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 TMPRSS13Q9BYE2 586 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 METRNQ9UJH8 293 aa15.94■□□□□ 0.14
COL5A1-203ENST00000460264 LOC105371242A0A075B767 164 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 RIIAD1A6NNX1 92 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 AVPP01185 164 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 IFNGP01579 166 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 SPARCP09486 303 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 CLUP10909 449 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 FMO3P31513 532 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 ENTPD1P49961 510 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 LCN2P80188 198 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 MALLQ13021 153 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 PCK2Q16822 640 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 DCAF12L2Q5VW00 463 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 LIPNQ5VXI9 398 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 DCXRQ7Z4W1 244 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF511Q8NB15 262 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 TEX47Q8TBZ9 253 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 BCAS4Q8TDM0 211 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 ST7LQ8TDW4 575 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 CMC2Q9NRP2 79 aa15.93■□□□□ 0.14
COL5A1-203ENST00000460264 F5H5P2 479 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 TMEM178BH3BS89 294 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 J3QLI3 93 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 IFNL4K9M1U5 179 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF3P17036 446 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 ANOS1P23352 680 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 SLC6A9P48067 706 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 SRP9P49458 86 aaKnown RBP15.92■□□□□ 0.14
COL5A1-203ENST00000460264 SNAI3Q3KNW1 292 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 DNAL1Q4LDG9 190 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 TMEM179BQ7Z7N9 219 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 LRRC28Q86X40 367 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-203ENST00000460264 KLHL36Q8N4N3 616 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 TEX29Q8N6K0 151 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 IQCF1Q8N6M8 205 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 OR6K6Q8NGW6 343 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 REPIN1Q9BWE0 567 aaKnown RBP15.92■□□□□ 0.14
COL5A1-203ENST00000460264 TMEM100Q9NV29 134 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 PCDHB10Q9UN67 800 aa15.92■□□□□ 0.14
COL5A1-203ENST00000460264 GYG2O15488 501 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 HLA-DPB1P04440 258 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 HOXB6P17509 224 aaKnown RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 GATA3P23771 443 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 ZFP36P26651 326 aaKnown RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 GRK5P34947 590 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 MDH2P40926 338 aaKnown RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 SCGB2A2Q13296 93 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 FLOT2Q14254 428 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 TEX30Q5JUR7 227 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 LINC01590Q5TEZ4 76 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 DRAM2Q6UX65 266 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 PGAP1Q75T13 922 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 MRPL21Q7Z2W9 205 aaKnown RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 C1QL2Q7Z5L3 287 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF420Q8TAQ5 688 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 SLCO4A1Q96BD0 722 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 SLC7A6OSQ96CW6 309 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 SLAMF6Q96DU3 332 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 COPS4Q9BT78 406 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 OCEL1Q9H607 264 aa15.91■□□□□ 0.14
COL5A1-203ENST00000460264 PATZ1Q9HBE1 687 aaKnown RBP15.91■□□□□ 0.14
COL5A1-203ENST00000460264 IGHV3-64DA0A0J9YX35 117 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 C5orf63A6NC05 138 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 F5H0A9 414 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-203ENST00000460264 H3BN98 237 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF593O00488 134 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-203ENST00000460264 FOXH1O75593 365 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 BLVRAP53004 296 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 ZNF92Q03936 586 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 MOGAT3Q86VF5 341 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 MUC20Q8N307 709 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-203ENST00000460264 OR2AE1Q8NHA4 323 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 MED20Q9H944 212 aa15.9■□□□□ 0.14
COL5A1-203ENST00000460264 PDP1Q9P0J1 537 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-203ENST00000460264 PPIAL4EA0A075B759 164 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 PPIAL4CA0A0B4J2A2 164 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 FAM183AA6NL82 134 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms