RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SPAG16Q8N0X2 631 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 PATE1Q8WXA2 126 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ARL11Q969Q4 196 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 FOXRED1Q96CU9 486 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 LURAP1Q96LR2 239 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ELF4Q99607 663 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 NKX3-1Q99801 234 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 NUDT16L1Q9BRJ7 211 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 SEC11CQ9BY50 192 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 NMES1Q9C002 83 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 LAT2Q9GZY6 243 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TREM2Q9NZC2 230 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 HHLA2Q9UM44 414 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 FARSAQ9Y285 508 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 TMED7Q9Y3B3 224 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 LRP12Q9Y561 859 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 PCDH15Q96QU1 1955 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TRAV36DV7A0A075B6V5 113 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 A0A1B0GV90 55 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 METTL21EPA6NDL7 271 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RAB27BO00194 218 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 EFSO43281 561 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ZNF208O43345 1280 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RAD1O60671 282 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 UTS2O95399 124 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 MT-ATP6P00846 226 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 KLK3P07288 261 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 DCNP07585 359 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 ST6GAL1P15907 406 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 PVALBP20472 110 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 PSMB6P28072 239 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 AVPR2P30518 371 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 NTSR1P30989 418 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RPL27P61353 136 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 YPEL5P62699 121 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SGCBQ16585 318 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TMEM88Q6PEY1 159 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CLEC2AQ6UVW9 174 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 IL34Q6ZMJ4 242 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 GTPBP8Q8N3Z3 284 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR4S1Q8NGB4 309 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR4K17Q8NGC6 315 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR51A2Q8NGJ7 313 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR4A4PQ8NGN8 299 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR52N5Q8NH56 324 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SLC25A36Q96CQ1 311 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CDC6Q99741 560 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CMKLR1Q99788 373 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ABHD6Q9BV23 337 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TXNIPQ9H3M7 391 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 NIT2Q9NQR4 276 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 MMP26Q9NRE1 261 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SH3BGRL2Q9UJC5 107 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 GDF2Q9UK05 429 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 RAB22AQ9UL26 194 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 R4GMQ9 66 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 KIR2DS5A0A0G2JLQ3 304 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 A0A0G2JNG1 304 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 A0A1W2PQF6 199 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 FITM1A5D6W6 292 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 TMEM210A6NLX4 147 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 KIR2DS3K7RE56 304 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 FADS1O60427 444 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CBR3O75828 277 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 STK17BO94768 372 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 NSA2O95478 260 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 BPNT1O95861 308 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 HLA-DQA2P01906 255 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 SPARCP09486 303 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 FAM157CP0CG43 387 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 LYL1P12980 280 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 PGAM2P15259 253 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CD46P15529 392 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 MAOAP21397 527 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 HNRNPA2B1P22626 353 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 SLC6A9P48067 706 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CX3CR1P49238 355 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 GSK3AP49840 483 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 PNLIPRP2P54317 469 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 BLOC1S1P78537 153 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CYCSP99999 105 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 DEFA6Q01524 100 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 BIKQ13323 160 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 EIF2B1Q14232 305 aaKnown RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 KIR2DS5Q14953 304 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 ATXN7L3Q14CW9 347 aaPredicted RBP7.59□□□□□ -1.19
VPS50-208ENST00000458707 ACKR1Q16570 336 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 DEFB110Q30KQ9 67 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CDNFQ49AH0 187 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 TMEM71Q6P5X7 295 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 UNQ6126/PRO20091Q6UXV3 157 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CD163Q86VB7 1156 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 OOSP2Q86WS3 158 aa7.59□□□□□ -1.19
VPS50-208ENST00000458707 CBLN2Q8IUK8 224 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms