RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DCTDP32321 178 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 LIPAP38571 399 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 MPV17P39210 176 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 ZNF121P58317 390 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 ACBD7Q8N6N7 88 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 YIPF7Q8N8F6 280 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 PGAM5Q96HS1 289 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 TTTY10Q9BZA0 68 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 ITGB1BP2Q9UKP3 347 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 PRR14LQ5THK1 2151 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
NCKIPSD-207ENST00000453349 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 METTL15A6NJ78 407 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 H7C417 338 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 M0R233 179 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 XRCC2O43543 280 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 TIMM8AO60220 97 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ADRA2AP08913 450 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 TACSTD2P09758 323 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 SLC2A1P11166 492 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 PAX1P15863 534 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 SELEP16581 610 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 PPOXP50336 477 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 CSNK2BP67870 215 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 PSG7Q13046 419 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 SNCBQ16143 134 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF829Q3KNS6 432 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ALKBH6Q3KRA9 238 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 FBXW12Q6X9E4 464 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 FAM57BQ71RH2 274 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 KCTD20Q7Z5Y7 419 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 LRRC75A-AS1Q8N1F1 130 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 RAB1BQ9H0U4 201 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 POFUT1Q9H488 388 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 CYSLTR2Q9NS75 346 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF701Q9NV72 531 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 RAB26Q9ULW5 256 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 CELSR2Q9HCU4 2923 aa12.52□□□□□ -0.41
NCKIPSD-207ENST00000453349 ANKHD1Q8IWZ3 2542 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 PLSCR5A0PG75 271 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 J3QRE1 110 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 SULT1C4O75897 302 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 ALDH3B1P43353 468 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 PTH2RP49190 550 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 ATP5J2P56134 94 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZNF85Q03923 595 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 HLXQ14774 488 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 SNAI3Q3KNW1 292 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 SSX6Q7RTT6 188 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 RFLNBQ8N5W9 214 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 OR52I1Q8NGK6 324 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 FBLIM1Q8WUP2 373 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 PERPQ96FX8 193 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 FOXC2Q99958 501 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 ANKRD60Q9BZ19 345 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 GSX2Q9BZM3 304 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 OPA3Q9H6K4 179 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 FGF20Q9NP95 211 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 INPP5EQ9NRR6 644 aa12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 CGGBP1Q9UFW8 167 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 PURGQ9UJV8 347 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-207ENST00000453349 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 FAM20BO75063 409 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 KITLGP21583 273 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 MYF6P23409 242 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 CFL1P23528 166 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 MMP16P51512 607 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 ART1P52961 327 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 PSMA6P60900 246 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 ACTA2P62736 377 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 ACTG2P63267 376 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 MED21Q13503 144 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 GALEQ14376 348 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 GK2Q14410 553 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 ZMAT1Q5H9K5 638 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 GLYATL3Q5SZD4 288 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 FAM220AQ7Z4H9 259 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 LHFPL3Q86UP9 236 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 Q9H521 79 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 PLCXD1Q9NUJ7 323 aa12.5□□□□□ -0.41
NCKIPSD-207ENST00000453349 SCN3BQ9NY72 215 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms