RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DDX28Q9NUL7 540 aaKnown RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 COMMD3-BMI1R4GMX3 469 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 U3KQV3 271 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 NBEAL1Q6ZS30 2694 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 A8MXK9 166 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 F5H5P2 479 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 IFNL4K9M1U5 179 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 FOXH1O75593 365 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 MDH2P40926 338 aaKnown RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 SLC6A9P48067 706 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 HILS1P60008 231 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 CRMP1Q14194 572 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 PCK2Q16822 640 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 MICAQ29983 383 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 OR2T5Q6IEZ7 315 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 USP43Q70EL4 1123 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 SLC37A3Q8NCC5 494 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 DEFB108BQ8NET1 73 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 PROKR2Q8NFJ6 384 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 OR51L1Q8NGJ5 315 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 OR2T29Q8NH02 315 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 OR4Q3Q8NH05 313 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 ZFAND2BQ8WV99 257 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 HCAR1Q9BXC0 346 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 DGCR6LQ9BY27 220 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 NMNAT2Q9BZQ4 307 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 C7orf69Q9H7B7 122 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 MMP26Q9NRE1 261 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 TBC1D23Q9NUY8 699 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 PRPF19Q9UMS4 504 aaKnown RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 PCDHB10Q9UN67 800 aa10.48□□□□□ -0.73
CPSF4-208ENST00000452047 SAMHD1Q9Y3Z3 626 aaKnown RBP10.48□□□□□ -0.73
CPSF4-208ENST00000452047 TVP23AA6NH52 213 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 CEACAM18A8MTB9 384 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 TRAPPC2LH3BP13 241 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 M0R135 149 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 RGS9O75916 674 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 SOX14O95416 240 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 LCATP04180 440 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 HLA-DPB1P04440 258 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF823P16415 610 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 SELEP16581 610 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 GATA4P43694 442 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 SRP9P49458 86 aaKnown RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 TPTEP56180 551 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 SNAI3Q3KNW1 292 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 FAM98BQ52LJ0 330 aaKnown RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 MUC20Q8N307 709 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 CCDC197Q8NCU1 140 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 OR2T33Q8NG76 320 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 OR9Q1Q8NGQ5 310 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 NANPQ8TBE9 248 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 CCDC124Q96CT7 223 aaKnown RBP10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ASB9Q96DX5 294 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF799Q96GE5 643 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 TSSK6Q9BXA6 273 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 REEP1Q9H902 201 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 ARMC1Q9NVT9 282 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 TAS2R1Q9NYW7 299 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 BAIAP2Q9UQB8 552 aa10.47□□□□□ -0.73
CPSF4-208ENST00000452047 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 C5orf63A6NC05 138 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 ACOT8O14734 319 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 FSTL3O95633 263 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 CYB5R3P00387 301 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-208ENST00000452047 GYPBP06028 91 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 RAP2AP10114 183 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 CLUP10909 449 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF12P17014 697 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 SPI1P17947 270 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 PMELP40967 661 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 SLC25A1P53007 311 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 MALLQ13021 153 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 MAB21L1Q13394 359 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 TUSC1Q2TAM9 212 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 DRAM2Q6UX65 266 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 CD300LDQ6UXZ3 194 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 PGAP1Q75T13 922 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 DCXRQ7Z4W1 244 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 MOGAT3Q86VF5 341 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 CELF2-AS1Q8N7Q2 184 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 DVL3Q92997 716 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-208ENST00000452047 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
CPSF4-208ENST00000452047 SPTSSAQ969W0 71 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 CLPTM1LQ96KA5 538 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 SLC6A7Q99884 636 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 NIPSNAP1Q9BPW8 284 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 C1orf21Q9H246 121 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 TMEM165Q9HC07 324 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 TMEM100Q9NV29 134 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 LRCH1Q9Y2L9 728 aa10.46□□□□□ -0.73
CPSF4-208ENST00000452047 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF205O95201 554 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 SPARCP09486 303 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms