RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 C2orf68Q2NKX9 166 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 RBM48Q5RL73 367 aaKnown RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM59Q9BXS4 323 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GPN1Q9HCN4 374 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ASH2LQ9UBL3 628 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ST6GALNAC2Q9UJ37 374 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 EXOGQ9Y2C4 368 aaKnown RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMED3Q9Y3Q3 217 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 LOC100506127A0A0U1RQW1 187 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 A0A1W2PQD3 144 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 B4DSR2 109 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 H0Y8G0 127 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DEGS1O15121 323 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ATG12O94817 140 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 PPP1CBP62140 327 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GUCA2AQ02747 115 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 NEDD8Q15843 81 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SPANXN2Q5MJ10 180 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GDPGP1Q6ZNW5 385 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR10AD1Q8NGE0 317 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 RPS4Y2Q8TD47 263 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF721Q8TF20 911 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 CREB3L1Q96BA8 519 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TLCD1Q96CP7 247 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 PPA2Q9H2U2 334 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 GREB1Q4ZG55 1949 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR5H14A6NHG9 310 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR5H1A6NKK0 313 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM25EA8MYX2 175 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 RAB27BO00194 218 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TYROBPO43914 113 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 TOX4O94842 621 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 CSN2P05814 226 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAHP16930 419 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 WNT3P56703 355 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 PITPNAQ00169 270 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 RIPPLY1Q0D2K3 151 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACSF3Q4G176 576 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-209ENST00000448940 PYHIN1Q6K0P9 492 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC39A9Q9NUM3 307 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 COMMD9Q9P000 198 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 DAPK2Q9UIK4 370 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 FBXL2Q9UKC9 423 aa5□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF850A8MQ14 1090 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 TFP02787 698 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 HOXB1P14653 301 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 RAB2AP61019 212 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 DBPQ10586 325 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 PPP1R8Q12972 351 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 DMBX1Q8NFW5 382 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 ASB17Q8WXJ9 295 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 MAN2C1Q9NTJ4 1040 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC7A8Q9UHI5 535 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 H7C1C5 153 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 L7N2F9 121 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 NAT2P11245 290 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 TGM1P22735 817 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 PSMA1P25786 263 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 LCN6P62502 163 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 VAMP2P63027 116 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 BSPH1Q075Z2 132 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 SMIM21Q3B7S5 101 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OXLD1Q5BKU9 147 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 NSUN5P2Q63ZY6 315 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC38A6Q8IZM9 456 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR5R1Q8NH85 324 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 GINS3Q9BRX5 216 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 REG4Q9BYZ8 158 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 COL4A6Q14031 1691 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 LOC102723996A0A087X1L8 192 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 MED26O95402 600 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 PYCR1P32322 319 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 HNRNPFP52597 415 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 RRN3P1Q2M238 152 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 PLBD1Q6P4A8 553 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 DHRS4L2Q6PKH6 230 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR8J1Q8NGP2 316 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 MSI2Q96DH6 328 aaKnown RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 TNFRSF13CQ96RJ3 184 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 SSX3Q99909 188 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 TINAGL1Q9GZM7 467 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 HMG20AQ9NP66 347 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 A4GALTQ9NPC4 353 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 KIF25Q9UIL4 384 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF816-ZNF321PA0A0X1KG74 233 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 MEGF11A6BM72 1044 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 SH2D1BO14796 132 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 CLPXO76031 633 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 CR1LQ2VPA4 569 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 LSRQ86X29 649 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARMC10Q8N2F6 343 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR4F17Q8NGA8 305 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR13C2Q8NGS9 318 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 LHX4Q969G2 390 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR4F4Q96R69 305 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF300Q96RE9 604 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 C1QTNF3Q9BXJ4 246 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 VAPAQ9P0L0 249 aa4.99□□□□□ -1.61
CDC42BPA-209ENST00000448940 KCNG2Q9UJ96 466 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms