RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IGHV3-64DA0A0J9YX35 117 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 M0QYG6 137 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 ACTL6AO96019 429 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 ERGP11308 486 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 ARID1BQ8NFD5 2236 aaPredicted RBP12.46□□□□□ -0.42
RPL28-202ENST00000426763 TMIGD3P0DMS9 266 aaPredicted RBP12.46□□□□□ -0.42
RPL28-202ENST00000426763 DDA1Q9BW61 102 aa12.46□□□□□ -0.42
RPL28-202ENST00000426763 PSME4Q14997 1843 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 OR2M5A3KFT3 312 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 PLPP3O14495 311 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 SMIM18P0DKX4 95 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 CASP3P42574 277 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HMGA2P52926 109 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 DVL3Q92997 716 aaPredicted RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 SIRPB1O00241 398 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 S100A7P31151 101 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 THBS4P35443 961 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 DDOSTP39656 456 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FGF11Q92914 225 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 MLXQ9UH92 298 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 LRP12Q9Y561 859 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FAM90A27PA6NNH2 459 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 TSPAN4O14817 238 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 IFNA4P05014 189 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HAAOP46952 286 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 TGM4P49221 684 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HOXA1P49639 335 aaPredicted RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 GAB4Q2WGN9 574 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 TMPRSS7Q7RTY8 843 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FBXL14Q8N1E6 418 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 SLC25A21Q9BQT8 299 aaPredicted RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 A0A1W2PS29 197 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FITM1A5D6W6 292 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FMODQ06828 376 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 TPBGQ13641 420 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HES1Q14469 280 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 SFRP5Q5T4F7 317 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 RNLSQ5VYX0 342 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 FAM210AQ96ND0 272 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 TSPAN32Q96QS1 320 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 PLK3Q9H4B4 646 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 HAO2Q9NYQ3 351 aa12.45□□□□□ -0.42
RPL28-202ENST00000426763 TMEFF2Q9UIK5 374 aaPredicted RBP12.45□□□□□ -0.42
RPL28-202ENST00000426763 KNTC1P50748 2209 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 CCR9P51686 369 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 FUT6P51993 359 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 RAP2BP61225 183 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 GK2Q14410 553 aaPredicted RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 CD226Q15762 336 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 HEPHL1Q6MZM0 1159 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 NLRC3Q7RTR2 1065 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 MCHR2Q969V1 340 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SPACA5Q96QH8 159 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 TRIOBPQ9H2D6 2365 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 HRKO00198 91 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SHOXO15266 292 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 MED6O75586 246 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 CSF3P09919 207 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SNRPD2P62316 118 aaKnown RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 CD300LDQ6UXZ3 194 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 PP6455Q8WZ26 134 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 A0A1B0GV50 99 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 B8ZZF3 427 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 GABARAPH6UMI1 98 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 PHF1O43189 567 aaPredicted RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 TSPAN15O95858 294 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SFTPCP11686 197 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 NRARPQ7Z6K4 114 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 DEDD2Q8WXF8 326 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 TM4SF19Q96DZ7 209 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 TRAPPC4Q9Y296 219 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 TERTO14746 1132 aaKnown RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 APOA2P02652 100 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 SOX18P35713 384 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 ZNF83P51522 516 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 ACSM1Q08AH1 577 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 SLC25A26Q70HW3 274 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 RDH5Q92781 318 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 UNKLQ9H9P5 680 aaKnown RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
RPL28-202ENST00000426763 ZNF391Q9UJN7 358 aa12.44□□□□□ -0.42
RPL28-202ENST00000426763 ABCD4O14678 606 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 SPDEFO95238 335 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 TNFRSF1AP19438 455 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 ZNF136P52737 540 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 MLF1P58340 268 aa12.43□□□□□ -0.42
RPL28-202ENST00000426763 FABP5Q01469 135 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms