RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NECAP2Q9NVZ3 263 aa13.76□□□□□ -0.21
CHCHD3-202ENST00000423635 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 A0A1B0GVI7 797 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OR10H3O60404 316 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OR1E2P47887 323 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 SLC9A3P48764 834 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 PRKCDQ05655 676 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 GK2Q14410 553 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OXLD1Q5BKU9 147 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 MESTQ5EB52 335 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OTPQ5XKR4 325 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 C11orf88Q6PI97 169 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 VMO1Q7Z5L0 202 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 GLB1L2Q8IW92 636 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OR5R1Q8NH85 324 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 FN3KRPQ9HA64 309 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 NKIRAS1Q9NYS0 192 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 KAAG1Q9UBP8 84 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 COA3Q9Y2R0 106 aaPredicted RBP13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 ADAM18Q9Y3Q7 739 aa13.75□□□□□ -0.21
CHCHD3-202ENST00000423635 OOEPA6NGQ2 149 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 XKRYO14609 159 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 DVL1O14640 695 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 KHDRBS3O75525 346 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 CD14P08571 375 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 GABRA5P31644 462 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 KIR2DS4P43632 304 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 EFNB2P52799 333 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 OR8B8Q15620 311 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 KRTAP27-1Q3LI81 207 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 BEND6Q5SZJ8 279 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 NRMQ8IXM6 262 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 MICU2Q8IYU8 434 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 SPERTQ8NA61 448 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 GJC3Q8NFK1 279 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 Q96M85 177 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 HDHD2Q9H0R4 259 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 SEMA6AQ9H2E6 1030 aa13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 AURKAIP1Q9NWT8 199 aaPredicted RBP13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 RPUSD1Q9UJJ7 312 aaKnown RBP13.74□□□□□ -0.21
CHCHD3-202ENST00000423635 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 EFCAB9A8MZ26 197 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 XPNPEP2O43895 674 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 SLC16A7O60669 478 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 TSPEARQ8WU66 669 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 PRRC1Q96M27 445 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 SLC22A4Q9H015 551 aa13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 NMNAT1Q9HAN9 279 aaPredicted RBP13.73□□□□□ -0.21
CHCHD3-202ENST00000423635 ANGPT2O15123 496 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 GMDSO60547 372 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 GYPAP02724 150 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 ZNF26P17031 533 aaPredicted RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 RPL4P36578 427 aaKnown RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 GUCA2AQ02747 115 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 NFYCQ13952 458 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 CALHM3Q86XJ0 350 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 FAM90A1Q86YD7 464 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 RNF113BQ8IZP6 322 aaKnown RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 BOLLQ8N9W6 283 aaKnown RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 SLCO4A1Q96BD0 722 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 VSX1Q9NZR4 365 aaPredicted RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 FOXJ3Q9UPW0 622 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 SIGLEC9Q9Y336 463 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 NOP16Q9Y3C1 178 aaKnown RBP13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 LHFPL6Q9Y693 200 aa13.72□□□□□ -0.21
CHCHD3-202ENST00000423635 LHBP01229 141 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 IFNA14P01570 189 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 ACSM4P0C7M7 580 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 EEF1B2P24534 225 aaKnown RBP13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 IFNA8P32881 189 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 PRSS12P56730 875 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 OR8G1Q15617 311 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 NANOGP8Q6NSW7 305 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 GCSAMQ8N6F7 178 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 PPP1R35Q8TAP8 253 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 SGCDQ92629 289 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 ZNF570Q96NI8 536 aa13.71□□□□□ -0.21
CHCHD3-202ENST00000423635 COL7A1Q02388 2944 aa13.71□□□□□ -0.22
CHCHD3-202ENST00000423635 CDC42EP2O14613 210 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 NPFFO15130 113 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 VSIG8P0DPA2 414 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 CA6P23280 308 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 MAGOHP61326 146 aaKnown RBP13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 MALLQ13021 153 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 ZBED5Q49AG3 693 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 PGM2L1Q6PCE3 622 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 C1orf122Q6ZSJ8 110 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 TMPRSS11FQ6ZWK6 438 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 PGAP1Q75T13 922 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 C11orf44Q8N8P7 122 aa13.7□□□□□ -0.22
CHCHD3-202ENST00000423635 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms