RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 CLN8Q9UBY8 286 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 TRRAPQ9Y4A5 3859 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 IGLV1-36A0A0B4J1U3 117 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 DCTN6O00399 190 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 PLATP00750 562 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 SLC6A6P31641 620 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 RAD23AP54725 363 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 PRSS12P56730 875 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 HIST1H3AP68431 136 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 PAX2Q02962 417 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 SLC9A3R2Q15599 337 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 SLC36A3Q495N2 470 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 C16orf89Q6UX73 402 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 HIST2H3AQ71DI3 136 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 LINC00346Q8IVM7 164 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 PITX2Q99697 317 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 ATF6BQ99941 703 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 NUDT16L1Q9BRJ7 211 aaKnown RBP13.5□□□□□ -0.25
COL18A1-205ENST00000423214 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 SRA1Q9HD15 236 aaKnown RBP13.5□□□□□ -0.25
COL18A1-205ENST00000423214 RPRD1BQ9NQG5 326 aaKnown RBP13.5□□□□□ -0.25
COL18A1-205ENST00000423214 MAGEL2Q9UJ55 1249 aa13.5□□□□□ -0.25
COL18A1-205ENST00000423214 POM121CA8CG34 1229 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 B2RBV5 119 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 F5H5K5 113 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 DYNC1I1O14576 645 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 PHYHO14832 338 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 ARPC2O15144 300 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 HLA-DPB1P04440 258 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 ACSM4P0C7M7 580 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 NOS3P29474 1203 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 SPIBQ01892 262 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 GPR157Q5UAW9 335 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 CFAP77Q6ZQR2 320 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 DCDC5Q6ZRR9 648 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 MRPL21Q7Z2W9 205 aaKnown RBP13.49□□□□□ -0.25
COL18A1-205ENST00000423214 SLC26A10Q8NG04 563 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 ZDHHC16Q969W1 377 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 NMNAT3Q96T66 252 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 IFT27Q9BW83 186 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 OR52D1Q9H346 318 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 MMADHCQ9H3L0 296 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-205ENST00000423214 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 B9D1Q9UPM9 204 aa13.49□□□□□ -0.25
COL18A1-205ENST00000423214 NOP16Q9Y3C1 178 aaKnown RBP13.49□□□□□ -0.25
COL18A1-205ENST00000423214 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 KCNAB3O43448 404 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 ENSAO43768 121 aaKnown RBP13.48□□□□□ -0.25
COL18A1-205ENST00000423214 GADD45GO95257 159 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 FSTL3O95633 263 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 LCATP04180 440 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 SEMG1P04279 462 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 GATA4P43694 442 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 SMIM11AP58511 58 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 TRAP1Q12931 704 aaKnown RBP13.48□□□□□ -0.25
COL18A1-205ENST00000423214 ECH1Q13011 328 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 GK2Q14410 553 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-205ENST00000423214 OR8G1Q15617 311 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 SLC18B1Q6NT16 456 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 BRD3OSQ6XYD6 125 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 COLCA1Q6ZS62 124 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 PGAP1Q75T13 922 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 OR6V1Q8N148 313 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 CELF2-AS1Q8N7Q2 184 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 OR4K13Q8NH42 304 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 SPRYD4Q8WW59 207 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-205ENST00000423214 ERGIC1Q969X5 290 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 NSL1Q96IY1 281 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 DHRS1Q96LJ7 313 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 FN3KQ9H479 309 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 UFSP2Q9NUQ7 469 aa13.48□□□□□ -0.25
COL18A1-205ENST00000423214 KIR2DS1A0A191URI9 304 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 HOXA3O43365 443 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 FAM20BO75063 409 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 HIST1H1CP16403 213 aaKnown RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 CD200P41217 278 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 TPTEP56180 551 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 FGF12P61328 243 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 KCNJ8Q15842 424 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 PRAMEF6Q5VXH4 476 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 WDR25Q64LD2 544 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 TREML4Q6UXN2 200 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 SDR9C7Q8NEX9 313 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 OR10S1Q8NGN2 331 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 MCUR1Q96AQ8 359 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-205ENST00000423214 SLCO4A1Q96BD0 722 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
COL18A1-205ENST00000423214 FUZQ9BT04 418 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms