RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NANPQ8TBE9 248 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 ZNRF4Q8WWF5 429 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 DDOQ99489 341 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 CDADC1Q9BWV3 514 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 MMP26Q9NRE1 261 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 DDX28Q9NUL7 540 aaKnown RBP12.91□□□□□ -0.34
TPM1-207ENST00000403994 IL20Q9NYY1 176 aa12.91□□□□□ -0.34
TPM1-207ENST00000403994 POLR3KQ9Y2Y1 108 aaPredicted RBP12.91□□□□□ -0.34
TPM1-207ENST00000403994 TVP23AA6NH52 213 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 M0R135 149 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 SOX14O95416 240 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 CYB5R3P00387 301 aaPredicted RBP12.9□□□□□ -0.34
TPM1-207ENST00000403994 GASTP01350 101 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 HLA-DPB1P04440 258 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 SELEP16581 610 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 ANOS1P23352 680 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.34
TPM1-207ENST00000403994 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 DHFR2Q86XF0 187 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 LNX2Q8N448 690 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 OR2T4Q8NH00 348 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 ZNF799Q96GE5 643 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 CCT8L2Q96SF2 557 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 SUCNR1Q9BXA5 334 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 LRCH1Q9Y2L9 728 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
TPM1-207ENST00000403994 PKD1L1Q8TDX9 2849 aa12.9□□□□□ -0.34
TPM1-207ENST00000403994 DOCK11Q5JSL3 2073 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ZNF205O95201 554 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 LCATP04180 440 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ZNF823P16415 610 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ZNF12P17014 697 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
TPM1-207ENST00000403994 GATA4P43694 442 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 SLC6A9P48067 706 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 TPTEP56180 551 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ACTG1P63261 375 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 MALLQ13021 153 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 CRMP1Q14194 572 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 SNAI3Q3KNW1 292 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ESCO2Q56NI9 601 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 NAA40Q86UY6 237 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 BPIFB2Q8N4F0 458 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 OR4Q3Q8NH05 313 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
TPM1-207ENST00000403994 NSL1Q96IY1 281 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 RBM4Q9BWF3 364 aaKnown RBP12.89□□□□□ -0.35
TPM1-207ENST00000403994 TSSK6Q9BXA6 273 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 DGCR6LQ9BY27 220 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 NMNAT2Q9BZQ4 307 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 ARMC1Q9NVT9 282 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 U3KQV3 271 aa12.89□□□□□ -0.35
TPM1-207ENST00000403994 FAM107AO95990 144 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 GYPBP06028 91 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 CALB2P22676 271 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 MS4A2Q01362 244 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 ZNF154Q13106 437 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 FAM98BQ52LJ0 330 aaKnown RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 ARMCX4Q5H9R4 360 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 PGAP1Q75T13 922 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 OR2AE1Q8NHA4 323 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 C22orf15Q8WYQ4 148 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 DVL3Q92997 716 aaPredicted RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 POP5Q969H6 163 aaKnown RBP12.88□□□□□ -0.35
TPM1-207ENST00000403994 SPTSSAQ969W0 71 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 REEP1Q9H902 201 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 ESM1Q9NQ30 184 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 TMEM100Q9NV29 134 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 OR5V1Q9UGF6 321 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 INSIG2Q9Y5U4 225 aa12.88□□□□□ -0.35
TPM1-207ENST00000403994 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 LRRC30A6NM36 301 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 SPARCP09486 303 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 T-ENOLP0DO92 83 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 SPI1P17947 270 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 PMELP40967 661 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 CD200P41217 278 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 ENTPD1P49961 510 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 SLC25A1P53007 311 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 RAD23AP54725 363 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 PCK2Q16822 640 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 MICAQ29983 383 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 KLBQ86Z14 1044 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 C1orf87Q8N0U7 546 aa12.87□□□□□ -0.35
TPM1-207ENST00000403994 CELF2-AS1Q8N7Q2 184 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms