RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 CT45A3Q8NHU0 189 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 NGBQ9NPG2 151 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 LANCL2Q9NS86 450 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 OR51B4Q9Y5P0 310 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 KCNE3Q9Y6H6 103 aa11.9□□□□□ -0.5
LCA5-202ENST00000392959 SHROOM3Q8TF72 1996 aa11.9□□□□□ -0.51
LCA5-202ENST00000392959 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.51
LCA5-202ENST00000392959 GLAP06280 429 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 BAMBIQ13145 260 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 TMEM88Q6PEY1 159 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 TMEM178AQ8NBL3 297 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PBOV1Q9GZY1 135 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 ZNF768Q9H5H4 540 aaKnown RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PDGFBP01127 241 aaPredicted RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 C1QAP02745 245 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 IL5P05113 134 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 MYOGP15173 224 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 ATF1P18846 271 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 EN2P19622 333 aaPredicted RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 PPP2CBP62714 309 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PPP2CAP67775 309 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SLC10A1Q14973 349 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 YRDCQ86U90 279 aaKnown RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 CATSPERDQ86XM0 798 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 MORN4Q8NDC4 146 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 RDH5Q92781 318 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 ARHGDIGQ99819 225 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 FAM221AA4D161 298 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PYCARD-AS1I3L0S3 204 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 LRP3O75074 770 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 RPUSD3Q6P087 351 aaKnown RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 LHX4Q969G2 390 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 UQCC2Q9BRT2 126 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 PLEKHB1Q9UF11 243 aaPredicted RBP11.89□□□□□ -0.51
LCA5-202ENST00000392959 FAM186AA6NE01 2351 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 CRYBB2P43320 205 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SHBQ15464 509 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 CLLU1Q5K131 121 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 TXN2Q99757 166 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 C12orf49Q9H741 205 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
LCA5-202ENST00000392959 OR6C68A6NDL8 312 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 YKT6O15498 198 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 NRASP01111 189 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 LIMS3P0CW19 117 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 LIMS4P0CW20 117 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 CAPZBP47756 277 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 CDK5Q00535 292 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 PRAMEF5Q5TYX0 476 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 ZNF468Q5VIY5 522 aaPredicted RBP11.88□□□□□ -0.51
LCA5-202ENST00000392959 PRAMEF6Q5VXH4 476 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 LAIR1Q6GTX8 287 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 TMPRSS11FQ6ZWK6 438 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 DND1Q8IYX4 353 aaKnown RBP11.88□□□□□ -0.51
LCA5-202ENST00000392959 GPX8Q8TED1 209 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 RTN4IP1Q8WWV3 396 aaPredicted RBP11.88□□□□□ -0.51
LCA5-202ENST00000392959 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 BCL2L11O43521 198 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 S100A8P05109 93 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 GABRA4P48169 554 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 OR8U1Q8NH10 309 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 TEX101Q9BY14 249 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 RNF150Q9ULK6 438 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 SIGLEC7Q9Y286 467 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 HMGA2P52926 109 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 GLDNQ6ZMI3 551 aaPredicted RBP11.88□□□□□ -0.51
LCA5-202ENST00000392959 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 HMGCLL1Q8TB92 370 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 IGLV3-16A0A075B6K0 115 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 RAB1AP62820 205 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 SSX1Q16384 188 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 PHYHD1Q5SRE7 291 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 ZNF626Q68DY1 528 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 PRDM7Q9NQW5 492 aa11.88□□□□□ -0.51
LCA5-202ENST00000392959 AHDC1Q5TGY3 1603 aaPredicted RBP11.87□□□□□ -0.51
LCA5-202ENST00000392959 RNF165Q6ZSG1 346 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 ARHGEF39Q8N4T4 335 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 GPR32P1Q8NGA4 272 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
LCA5-202ENST00000392959 MRGPRX1Q96LB2 322 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms