RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 B3GALT2O43825 422 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 NKX2-2O95096 273 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 HLA-DQA2P01906 255 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 MAS1LP35410 378 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 FHITP49789 147 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 CASP6P55212 293 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 TAS2R31P59538 309 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 SPCS3P61009 180 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 RAP1AP62834 184 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 PSG6Q00889 435 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTNS-202ENST00000381870 POC1AQ8NBT0 407 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 OR9K2Q8NGE7 335 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 DNAJA3Q96EY1 480 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 CYYR1Q96J86 154 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 SMOC1Q9H4F8 434 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 FBXL17Q9UF56 701 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 TMEM14AQ9Y6G1 99 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 IGLON5A6NGN9 336 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 BCAT2O15382 392 aaPredicted RBP13.39□□□□□ -0.27
CTNS-202ENST00000381870 CCL16O15467 120 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 LBX1P52954 281 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 SUPT4H1P63272 117 aaKnown RBP13.39□□□□□ -0.27
CTNS-202ENST00000381870 FDX2Q6P4F2 183 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 C19orf47Q8N9M1 422 aaKnown RBP13.39□□□□□ -0.27
CTNS-202ENST00000381870 TMEM104Q8NE00 496 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 OR5T3Q8NGG3 340 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 OR13C9Q8NGT0 318 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 THRSPQ92748 146 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 RAB7BQ96AH8 199 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 LURAP1Q96LR2 239 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 SERINC2Q96SA4 455 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 GPR61Q9BZJ8 451 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 MBNL1Q9NR56 388 aaKnown RBP13.39□□□□□ -0.27
CTNS-202ENST00000381870 POLE3Q9NRF9 147 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 PISDQ9UG56 409 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 MRPS2Q9Y399 296 aaKnown RBP13.39□□□□□ -0.27
CTNS-202ENST00000381870 FANCMQ8IYD8 2048 aa13.39□□□□□ -0.27
CTNS-202ENST00000381870 MED19A0JLT2 244 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 K7EQS6 105 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TIMP1P01033 207 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 THBS4P35443 961 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF84P51523 738 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 UNC119Q13432 240 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TCEA2Q15560 299 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TOMM34Q15785 309 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 NNATQ16517 81 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF74Q16587 644 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TMEM52BQ4KMG9 183 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 CACUL1Q86Y37 369 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 OR4K15Q8NH41 348 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 PMM1Q92871 262 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TCTN2Q96GX1 697 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 C2orf50Q96LR7 162 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 JSRP1Q96MG2 331 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 GNRHR2Q96P88 292 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 A0A1B0GV50 99 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF727A8MUV8 499 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF354AO60765 605 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 F10P00742 488 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 SFTPBP07988 381 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 SOD3P08294 240 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 DNASE1L1P49184 302 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 RPL18Q07020 188 aaKnown RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 PTCRAQ6ISU1 281 aaPredicted RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF679Q8IYX0 411 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 TERB2Q8NHR7 220 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 LPAR4Q99677 370 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 SUCNR1Q9BXA5 334 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 RAB11FIP5Q9BXF6 653 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 GPR132Q9UNW8 380 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTNS-202ENST00000381870 RANBP2P49792 3224 aaKnown RBP13.38□□□□□ -0.27
CTNS-202ENST00000381870 COL4A6Q14031 1691 aa13.38□□□□□ -0.27
CTNS-202ENST00000381870 ZNF726A6NNF4 738 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 CSTAP01040 98 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 SLC35G6P0C7Q6 338 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
CTNS-202ENST00000381870 GDI1P31150 447 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 ADPRHP54922 357 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 PKIAP61925 76 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 IL15RAQ13261 267 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 ZNF674Q2M3X9 581 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 FBXO42Q6P3S6 717 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 MARCH3Q86UD3 253 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 OR13C3Q8NGS6 347 aa13.37□□□□□ -0.27
CTNS-202ENST00000381870 NTNG2Q96CW9 530 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms