RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PLEKHA1Q9HB21 404 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 MUC6Q6W4X9 2439 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 NCKAP5O14513 1909 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 POU3F2P20265 443 aaPredicted RBP17.2■□□□□ 0.34
SSU72-204ENST00000378726 CDAP32320 146 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 SOX2P48431 317 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 GFRA1P56159 465 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 AANATQ16613 207 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 ZNF433Q8N7K0 673 aaPredicted RBP17.2■□□□□ 0.34
SSU72-204ENST00000378726 CENPMQ9NSP4 180 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 KLK11Q9UBX7 282 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 CYB5R1Q9UHQ9 305 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 GTF2A1LQ9UNN4 478 aa17.2■□□□□ 0.34
SSU72-204ENST00000378726 SMAD9O15198 467 aaKnown RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 PTHLHP12272 177 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 PSMB1P20618 241 aaKnown RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 SRSF6Q13247 344 aaKnown RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 TMPRSS7Q7RTY8 843 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 OR2V1Q8NHB1 315 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 CMTM3Q96MX0 182 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 SEC22CQ9BRL7 303 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 B4GALT7Q9UBV7 327 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 SLC22A13Q9Y226 551 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 TRBV5-5A0A0J9YX44 114 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 IFITM5A6NNB3 132 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 H3BSH0 61 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 ARPC1BO15143 372 aaKnown RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 CXCL13O43927 109 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 ZNF254O75437 659 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 ZNF432O94892 652 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 TGM6O95932 706 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 SP1P08047 785 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 RAD52P43351 418 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 EIF1AXP47813 144 aaKnown RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 RRADP55042 308 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 CLDN15P56746 228 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 SLC25A25Q6KCM7 469 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 ZIC4Q8N9L1 334 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 OR6N1Q8NGY5 312 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 OR10AC1Q8NH08 325 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 RADILQ96JH8 1075 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 ZNF703Q9H7S9 590 aaPredicted RBP17.19■□□□□ 0.34
SSU72-204ENST00000378726 COQ3Q9NZJ6 369 aa17.19■□□□□ 0.34
SSU72-204ENST00000378726 OR5H15A6NDH6 313 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 CSNK1A1P48729 337 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 TSPAN5P62079 268 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 DEGS2Q6QHC5 323 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 IGF2-ASQ6U949 168 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 GALNTL5Q7Z4T8 443 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.18■□□□□ 0.34
SSU72-204ENST00000378726 OR51A4Q8NGJ6 313 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 OR10D3Q8NH80 312 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 GPR148Q8TDV2 347 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 ZNF775Q96BV0 537 aaPredicted RBP17.18■□□□□ 0.34
SSU72-204ENST00000378726 ADGRG7Q96K78 797 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 SF3B5Q9BWJ5 86 aaKnown RBP17.18■□□□□ 0.34
SSU72-204ENST00000378726 TTTY12Q9BZ98 90 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 NPDC1Q9NQX5 325 aaPredicted RBP17.18■□□□□ 0.34
SSU72-204ENST00000378726 EMC3Q9P0I2 261 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 FBXL3Q9UKT7 428 aa17.18■□□□□ 0.34
SSU72-204ENST00000378726 ANKRD61A6NGH8 418 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 GABARAPH6UMI1 98 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 LINC01387J3KSC0 135 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 AIPO00170 330 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 HPNP05981 417 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 CELA3AP09093 270 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 MAPK3P27361 379 aaPredicted RBP17.17■□□□□ 0.34
SSU72-204ENST00000378726 PTH2RP49190 550 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 MFGE8Q08431 387 aaPredicted RBP17.17■□□□□ 0.34
SSU72-204ENST00000378726 FAAP20Q6NZ36 180 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 TMEM65Q6PI78 240 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 RNF133Q8WVZ7 376 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 C1orf198Q9H425 327 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 LIN7BQ9HAP6 207 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 FAM166BA8MTA8 275 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 KRT33AO76009 404 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 H2BFMP0C1H6 154 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 SOX8P57073 446 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 CATSPERDQ86XM0 798 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 MDS2Q8NDY4 140 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 ROBO4Q8WZ75 1007 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 TMEM54Q969K7 222 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 SLAMF6Q96DU3 332 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 CA10Q9NS85 328 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 PIPOXQ9P0Z9 390 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 KLF13Q9Y2Y9 288 aaPredicted RBP17.17■□□□□ 0.34
SSU72-204ENST00000378726 EMC9Q9Y3B6 208 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 R4GMQ9 66 aa17.17■□□□□ 0.34
SSU72-204ENST00000378726 M0R233 179 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 PDCD5O14737 125 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 PRAF2O60831 178 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 ECDO95905 644 aaPredicted RBP17.16■□□□□ 0.34
SSU72-204ENST00000378726 NR2C1P13056 603 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 PLGLB1Q02325 96 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 ELFN2Q5R3F8 820 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 PHYHD1Q5SRE7 291 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 METTL11BQ5VVY1 283 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 OR2AJ1Q8NGZ0 328 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 TCF7L1Q9HCS4 588 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms