RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 OTPQ5XKR4 325 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 GPR119Q8TDV5 335 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 NTN4Q9HB63 628 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 WNT16Q9UBV4 365 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 RP1P56715 2156 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 SDCBPO00560 298 aaPredicted RBP16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 TBX19O60806 448 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 ZNF793Q6ZN11 406 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 YIPF5Q969M3 257 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 C3orf49Q96BT1 292 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 TAAR9Q96RI9 348 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 ARHGDIGQ99819 225 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 SLC6A13Q9NSD5 602 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
CNTNAP3-204ENST00000377656 SLC22A20A6NK97 555 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 ZNF705GA8MUZ8 300 aaPredicted RBP16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 RAB27BO00194 218 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 INSM1Q01101 510 aaPredicted RBP16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 TMEM215Q68D42 235 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 TMUB2Q71RG4 321 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 ZNF683Q8IZ20 524 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 YIPF6Q96EC8 236 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 MFRPQ9BY79 579 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 ISG20L2Q9H9L3 353 aaKnown RBP16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 SHROOM3Q8TF72 1996 aa16.08■□□□□ 0.17
CNTNAP3-204ENST00000377656 SIRPB1O00241 398 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 FAM157BP0CG42 384 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZNF718Q3SXZ3 478 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZNF626Q68DY1 528 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 SCARB1Q8WTV0 552 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 IL20Q9NYY1 176 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 SEC16AO15027 2179 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 C1QBP02746 253 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 TGFBR1P36897 503 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 DSCR4P56555 118 aaPredicted RBP16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 HABP2Q14520 560 aaPredicted RBP16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 KIAA0040Q15053 153 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 OR10K2Q6IF99 312 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 MED18Q9BUE0 208 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 PLA2G2FQ9BZM2 168 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 IMPA2O14732 288 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 HRO43593 1189 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 CTSVO60911 334 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 PSMB3P49720 205 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 ROBO4Q8WZ75 1007 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 SUCNR1Q9BXA5 334 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 GSX2Q9BZM3 304 aa16.08■□□□□ 0.16
CNTNAP3-204ENST00000377656 TXNL1O43396 289 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ADRA2CP18825 462 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 GABRA4P48169 554 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 YBX1P67809 324 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ELFN2Q5R3F8 820 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 SLC25A26Q70HW3 274 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 C1orf87Q8N0U7 546 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 OR2G3Q8NGZ4 309 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZNF707Q96C28 371 aaPredicted RBP16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 FYTTD1Q96QD9 318 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 TBPP20226 339 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 SUB1P53999 127 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 CMTM2Q8TAZ6 248 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 SFT2D1Q8WV19 159 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 TAF9BQ9HBM6 251 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 PAPPA2Q9BXP8 1791 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ABCD3P28288 659 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 RAD52P43351 418 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZNF85Q03923 595 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 NKG7Q16617 165 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 CEACAM16Q2WEN9 425 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZDHHC23Q8IYP9 409 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 OR11G2Q8NGC1 345 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 MARC2Q969Z3 335 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 PLA2G12AQ9BZM1 189 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 RPS2P15880 293 aaKnown RBP16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 WFDC8Q8IUA0 241 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 RHNO1Q9BSD3 238 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 GNG13Q9P2W3 67 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 SLC23A1Q9UHI7 598 aa16.07■□□□□ 0.16
CNTNAP3-204ENST00000377656 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 HLA-HP01893 362 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 NPBWR1P48145 328 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 ZNF121P58317 390 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 AQP6Q13520 282 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 TOMM34Q15785 309 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 TMPRSS11FQ6ZWK6 438 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 LINC01555Q8NAE3 123 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 OR4C3Q8NH37 302 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 ALKBH3Q96Q83 286 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 AKIP1Q9NQ31 210 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 A0A0B4J203 849 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 FAM221AA4D161 298 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 FABP6P51161 128 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 TRA2AQ13595 282 aaKnown RBP eCLIP16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 Q6ZRG5 221 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 NAA40Q86UY6 237 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 KTI12Q96EK9 354 aaPredicted RBP16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 ARID1AO14497 2285 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 RAB19A4D1S5 217 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 OR5H8P0DN80 308 aa16.06■□□□□ 0.16
CNTNAP3-204ENST00000377656 NOVA1P51513 510 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms