RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 GALNT16Q8N428 558 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 OTOSQ8NHW6 89 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SIRT3Q9NTG7 399 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FBXO4Q9UKT5 387 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 KNTC1P50748 2209 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 A8MXE2 369 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 C17orf112F2Z3M2 114 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 AGPAT2O15120 278 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SRD5A2P31213 254 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 GALNSP34059 522 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 RAB11AP62491 216 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 IAH1Q2TAA2 248 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 TIGD3Q6B0B8 471 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 MRM1Q6IN84 353 aaKnown RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 STAC2Q6ZMT1 411 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FJX1Q86VR8 437 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SLC38A9Q8NBW4 561 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 OR6K3Q8NGY3 331 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 M1APQ8TC57 530 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 ING1Q9UK53 422 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SHISA8B8ZZ34 492 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 CLDN1O95832 211 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 OR8B4Q96RC9 309 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 RNF167Q9H6Y7 350 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF816-ZNF321PA0A0X1KG74 233 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 HPP00738 406 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 PEA15Q15121 130 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 OR51S1Q8NGJ8 323 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 CT62P0C5K7 136 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 AGFG1P52594 562 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 RAC1P63000 192 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 CT55Q8WUE5 264 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 TECTBQ96PL2 329 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 PHLDA2Q53GA4 152 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 BEX5Q5H9J7 111 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 RBMXL1Q96E39 390 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 PLK3Q9H4B4 646 aa16.11■□□□□ 0.17
CLSTN1-202ENST00000377298 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 A0A1W2PPC1 479 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 TNFSF12O43508 249 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 DDOSTP39656 456 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 HMGA2P52926 109 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 SHEQ5VZ18 495 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OR4Q3Q8NH05 313 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OR52I2Q8NH67 350 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OCIAD1Q9NX40 245 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 APOA2P02652 100 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 IGHV4-34P06331 123 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 BTG1P62324 171 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 CDK5Q00535 292 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OR5M9Q8NGP3 310 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OR13C5Q8NGS8 318 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 TMEFF2Q9UIK5 374 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 PPP3CBP16298 524 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 FABP6P51161 128 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 OR1F12Q8NHA8 337 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 AKR7LQ8NHP1 331 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 DYNC2LI1Q8TCX1 351 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 PAQR8Q8TEZ7 354 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 FAM234AQ9H0X4 552 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 ISG20L2Q9H9L3 353 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 RAB4BP61018 213 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 ZXDAP98168 799 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 RGS7BPQ6MZT1 257 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF529Q6P280 563 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 RBMS3Q6XE24 437 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 PP6455Q8WZ26 134 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 ZG16BQ96DA0 208 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 FBXL2Q9UKC9 423 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 TCFL5Q9UL49 500 aa16.1■□□□□ 0.17
CLSTN1-202ENST00000377298 C21orf140B9A014 251 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 LUMP51884 338 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 PCBP3P57721 371 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 CNR1P21554 472 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 RFX2P48378 723 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 FZD5Q13467 585 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 C2orf76Q3KRA6 126 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 KHDC1LQ5JSQ8 128 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 BRICD5Q6PL45 260 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 BATF2Q8N1L9 274 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 NPIPB8E9PQR5 432 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 HSD17B6O14756 317 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 FABP7O15540 132 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 FBXO24O75426 580 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 OMGP23515 440 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 CDAP32320 146 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 SOX18P35713 384 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 TGM4P49221 684 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 ATPAF1Q5TC12 328 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 CISD2Q8N5K1 135 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 RDH5Q92781 318 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 SLAMF9Q96A28 289 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 SPACA5Q96QH8 159 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 FAM212BQ9NTI7 297 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 EML2O95834 649 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 THBS4P35443 961 aa16.09■□□□□ 0.17
CLSTN1-202ENST00000377298 RAB35Q15286 201 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms