RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 ZNF585AQ6P3V2 769 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 CATSPERDQ86XM0 798 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 OR2I1PQ8NGU4 316 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 C8orf44Q96CB5 159 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 RPS10P5Q9NQ39 176 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 CLDN16Q9Y5I7 305 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 CFAP54Q96N23 3096 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 LOC107986453A0A1B0GWG9 222 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 PQLC2LA1A4F0 135 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 P2RY10O00398 339 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 EIF1AYO14602 144 aaKnown RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 LDLRAD4O15165 306 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 MUC1P15941 1255 aaPredicted RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 CPT2P23786 658 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 FCARP24071 287 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 EIF1AXP47813 144 aaKnown RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 ARRB1P49407 418 aaPredicted RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 TOMM20Q15388 145 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 ALG11Q2TAA5 492 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 TTLL10Q6ZVT0 673 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 ZNF440Q8IYI8 595 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 SLC30A7Q8NEW0 376 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 SEMA6DQ8NFY4 1073 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 AQP3Q92482 292 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 NRSN2Q9GZP1 204 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 RHOFQ9HBH0 211 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 ACKR4Q9NPB9 350 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 TMEM100Q9NV29 134 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 COA3Q9Y2R0 106 aaPredicted RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 NUP210LQ5VU65 1888 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 TEX13DA0A0J9YY54 714 aaPredicted RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 F8VVB4 439 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 F8VWA3 439 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 UTS2O95399 124 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 ABOP16442 354 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 GNALP38405 381 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 MST1LQ2TV78 715 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 CDPF1Q6NVV7 123 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 SSX9Q7RTT3 188 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 FOXRED2Q8IWF2 684 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 ZNF615Q8N8J6 731 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 STOML3Q8TAV4 291 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 ASB17Q8WXJ9 295 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 NAA11Q9BSU3 229 aaPredicted RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 SEC11CQ9BY50 192 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 HHLA2Q9UM44 414 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 hCG_1809904A0A1W2PP81 198 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 A0A1W2PR64 198 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 A0A1W2PRV1 198 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 CA3P07451 260 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 SNRNP70P08621 437 aaKnown RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 CASP6P55212 293 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 ELAVL1Q15717 326 aaKnown RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 USF2Q15853 346 aaPredicted RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 TMEM196Q5HYL7 178 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 THRSPQ92748 146 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 FGGYQ96C11 551 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 MMP26Q9NRE1 261 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 CENPMQ9NSP4 180 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 OR5AC2Q9NZP5 309 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 RP1P56715 2156 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 CLDN4O14493 209 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 SERPINA5P05154 406 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 PJVKQ0ZLH3 352 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 UNC119Q13432 240 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 GPM6BQ13491 265 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP49-201ENST00000373006 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 OOSP2Q86WS3 158 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 DMRTC2Q8IXT2 367 aaPredicted RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 OR52N4Q8NGI2 321 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 NRIP2Q9BQI9 281 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 PRO1933Q9H354 126 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 UNKLQ9H9P5 680 aaKnown RBP12.24□□□□□ -0.45
USP49-201ENST00000373006 PTPRSQ13332 1948 aa12.24□□□□□ -0.45
USP49-201ENST00000373006 M0R036 132 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 GUSBP08236 651 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 COL9A1P20849 921 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 ID4P47928 161 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 NPY4RP50391 375 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 C1orf61Q13536 156 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 FGF14Q92915 247 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 MMABQ96EY8 250 aaPredicted RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 GAL3ST4Q96RP7 486 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 PIGQQ9BRB3 760 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 PNO1Q9NRX1 252 aaKnown RBP12.23□□□□□ -0.45
USP49-201ENST00000373006 SLC2A8Q9NY64 477 aa12.23□□□□□ -0.45
USP49-201ENST00000373006 TMEM269A0A1B0GVZ9 245 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms