RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 HTR3DQ70Z44 454 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 POM121L2Q96KW2 1035 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 ZNF2Q9BSG1 426 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 TMEM231Q9H6L2 316 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 ASH2LQ9UBL3 628 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 H0Y8X5 98 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PTGESO14684 152 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 CPN1P15169 458 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 C21orf58P58505 322 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PAX5Q02548 391 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 B3GNT8Q7Z7M8 397 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PATE1Q8WXA2 126 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 TTC9Q92623 222 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 Q96M85 177 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PCOLCE2Q9UKZ9 415 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 USP3Q9Y6I4 520 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 FABP4P15090 132 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 AOAHP28039 575 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 HNRNPA3P51991 378 aaKnown RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 ZC3H3Q8IXZ2 948 aaKnown RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 MAGT1Q9H0U3 335 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 NEURL1O76050 574 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 IVDP26440 423 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 DOK5Q9P104 306 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 GYPAP02724 150 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PI3P19957 117 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 SMN1Q16637 294 aaKnown RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 PHOSPHO2Q8TCD6 241 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 AKIRIN1Q9H9L7 192 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 WASHC3Q9Y3C0 194 aa15.74■□□□□ 0.11
COL27A1-201ENST00000356083 TDRD15B5MCY1 1934 aaKnown RBP15.74■□□□□ 0.11
COL27A1-201ENST00000356083 BMP5P22003 454 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 HOXD13P35453 343 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 TPMTP51580 245 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 COX20Q5RI15 118 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 LAIR1Q6GTX8 287 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 OR51E1Q8TCB6 317 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 COL6A6A6NMZ7 2263 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 SLC22A20A6NK97 555 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 H3BP45 60 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 ATXN7O15265 892 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-201ENST00000356083 C7P10643 843 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 MLLT11Q13015 90 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-201ENST00000356083 ZNF586Q9NXT0 402 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 C5orf52A6NGY3 159 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 NDUFB3O43676 98 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 MBP02144 154 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 TOR2AQ5JU69 321 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 C1orf140Q5VVS0 124 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 MBOAT2Q6ZWT7 520 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 PGBD5Q8N414 524 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 OR51S1Q8NGJ8 323 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 ARHGDIGQ99819 225 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 SEC22CQ9BRL7 303 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 DLL4Q9NR61 685 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 MOKQ9UQ07 419 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 C3P01024 1663 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 ICMTO60725 284 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 SPINK9Q5DT21 86 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 ABCC6O95255 1503 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 A0A1B0GWA3 101 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 SULT1A1P50225 295 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 LSM11P83369 360 aaKnown RBP eCLIP15.73■□□□□ 0.118e-11■■■□□ 18.9
COL27A1-201ENST00000356083 HFEQ30201 348 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 TMEM88Q6PEY1 159 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 IGKV6D-41A0A0C4DH26 115 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 RRASP10301 218 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 GCSHP23434 173 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 OR6M1Q8NGM8 313 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 RPEQ96AT9 228 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 CNTD2Q9H8S5 307 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 SDR39U1Q9NRG7 319 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-201ENST00000356083 PSENENQ9NZ42 101 aa15.73■□□□□ 0.11
COL27A1-201ENST00000356083 OR5AL1P0C617 328 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 PMCHP20382 165 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 KIAA0141Q14154 515 aaPredicted RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ZNF628Q5EBL2 1059 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 PARM1Q6UWI2 310 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 RHOUQ7L0Q8 258 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 FCRL1Q96LA6 429 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 STRAPQ9Y3F4 350 aaKnown RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ECI1P42126 302 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 SFXN4Q6P4A7 337 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 FDX2Q6P4F2 183 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 OLIG1Q8TAK6 271 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 TMEM147Q9BVK8 224 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ZC3H12DA2A288 527 aaKnown RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 FPR3P25089 353 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 TRA2BP62995 288 aaKnown RBP15.72■□□□□ 0.11
COL27A1-201ENST00000356083 SARAFQ96BY9 339 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 SEH1LQ96EE3 360 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ADGRL4Q9HBW9 690 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 DEFB108AA8MXU0 73 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ADGRE4PQ86SQ3 457 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 ARL6IP6Q8N6S5 226 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 OR52I1Q8NGK6 324 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 OR6K3Q8NGY3 331 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 LINC00052Q96N35 136 aa15.72■□□□□ 0.11
COL27A1-201ENST00000356083 AGERQ15109 404 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms