RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TYMSP04818 313 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CHRNA7P36544 502 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 Q6ZVU0 165 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ARRDC3Q96B67 414 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CHST8Q9H2A9 424 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 TMEM9BQ9NQ34 198 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CLCF1Q9UBD9 225 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF25A6NGN4 478 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF4O60810 478 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ANKRD34CP0C6C1 535 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 FXYD4P59646 89 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 YBX1P67809 324 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 ANKLE1Q8NAG6 615 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PTX4Q96A99 478 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 OPALINQ96PE5 141 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 TP53RKQ96S44 253 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 NEURL2Q9BR09 285 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 HAO2Q9NYQ3 351 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 A0A0D9SEW6 157 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 EIF4E2O60573 245 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 ALDOCP09972 364 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 GPM6AP51674 278 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 TMEM241Q24JQ0 296 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 TBC1D28Q2M2D7 210 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ARSIQ5FYB1 569 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CARD17Q5XLA6 110 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 OR2M7Q8NG81 312 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ZNF583Q96ND8 569 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 MARCH5Q9NX47 278 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.34□□□□□ -1.232e-6■■■■■ 35.6
HTT-201ENST00000355072 H3BMH7 237 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ADRA1AP35348 466 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 JMJD6Q6NYC1 403 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 RPS19BP1Q86WX3 136 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 CHST14Q8NCH0 376 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 SCAMP5Q8TAC9 235 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 C19orf24Q9BVV8 132 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 LDB2O43679 373 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 FURINP09958 794 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 NTF3P20783 257 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 LEMD1Q68G75 181 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 OR2AK2Q8NG84 335 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 LHX4Q969G2 390 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 SLC17A9Q9BYT1 436 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 SLIRPQ9GZT3 109 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 MIR1-1HGQ9H1L0 117 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ZNF552Q9H707 407 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 USP36Q9P275 1121 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 IER3IP1Q9Y5U9 82 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 A0A1B0GVG6 124 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PPM1DO15297 605 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 FUT1P19526 365 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 PCSK6P29122 969 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GJA5P36382 358 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 YIPF1Q9Y548 306 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GABRR1P24046 479 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 LIPAP38571 399 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CELF2-AS1Q8N7Q2 184 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 OR52R1Q8NGF1 315 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 KTI12Q96EK9 354 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 P2RX4Q99571 388 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 CPPED1Q9BRF8 314 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 ADAT1Q9BUB4 502 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 STARD5Q9NSY2 213 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 LOC102723971A0A1B0GUV8 181 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 C1orf105O95561 183 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 UBE2IP63279 158 aaKnown RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 KCNJ10P78508 379 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 FZD2Q14332 565 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 RPS26P11Q5JNZ5 115 aaPredicted RBP7.34□□□□□ -1.23
HTT-201ENST00000355072 Q6ZN92 141 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 ZNF687Q8N1G0 1237 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 TMIGD2Q96BF3 282 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 GINS3Q9BRX5 216 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 EMCNQ9ULC0 261 aa7.34□□□□□ -1.23
HTT-201ENST00000355072 SORBS2O94875 1100 aaKnown RBP7.34□□□□□ -1.24
HTT-201ENST00000355072 FAM180BQ6P0A1 224 aa7.34□□□□□ -1.24
HTT-201ENST00000355072 LIPIQ6XZB0 460 aa7.34□□□□□ -1.24
HTT-201ENST00000355072 OR5AS1Q8N127 324 aa7.34□□□□□ -1.24
HTT-201ENST00000355072 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.24
HTT-201ENST00000355072 OR1L3Q8NH93 324 aa7.34□□□□□ -1.24
HTT-201ENST00000355072 ZMYND19Q96E35 227 aaPredicted RBP7.34□□□□□ -1.24
HTT-201ENST00000355072 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 CA3P07451 260 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 SEC11BP0C7V7 166 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 GLI3P10071 1580 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 CD200P41217 278 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 GSG1Q2KHT4 349 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 ZNF648Q5T619 568 aaPredicted RBP7.33□□□□□ -1.24
HTT-201ENST00000355072 RHCGQ9UBD6 479 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 WASHC3Q9Y3C0 194 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 RAB9AP51151 201 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 ERVFRD-1P60508 538 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 TREML2Q5T2D2 321 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 CGB2Q6NT52 195 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 TMEM130Q8N3G9 435 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 LPPQ93052 612 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
HTT-201ENST00000355072 PEF1Q9UBV8 284 aaKnown RBP7.33□□□□□ -1.24
HTT-201ENST00000355072 CUL9Q8IWT3 2517 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms