RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 YOD1Q5VVQ6 348 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 FAHD2BQ6P2I3 314 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 LSRQ86X29 649 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF764Q96H86 408 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 NDUFB11Q9NX14 153 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MIA3Q5JRA6 1907 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ZC3H12DA2A288 527 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 GASTP01350 101 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 SLC10A3P09131 477 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MTNR1BP49286 362 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 RBM11P57052 281 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM267Q0VDI3 215 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 FUT2Q10981 343 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 NTPCRQ9BSD7 190 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CGGBP1Q9UFW8 167 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 NDUFS8O00217 210 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 LAMTOR5O43504 91 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 OR1D5P58170 312 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CD226Q15762 336 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CTU1Q7Z7A3 348 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 OR4S1Q8NGB4 309 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 OR4C13Q8NGP0 309 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ADAT1Q9BUB4 502 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 DLL4Q9NR61 685 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 BOKQ9UMX3 212 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 C10orf71Q711Q0 1435 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 RNASET2O00584 256 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 SH2D1BO14796 132 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 PAPLNO95428 1278 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 PIPP12273 146 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CHRNA7P36544 502 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 LEXMQ3ZCV2 418 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 DPPA3Q6W0C5 159 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ANKLE1Q8NAG6 615 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 APOBEC3GQ9HC16 384 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 AKR7A3O95154 331 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 OR10J1P30954 320 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 EXOSC7Q15024 291 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 GPR87Q9BY21 358 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MAGT1Q9H0U3 335 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CTSFQ9UBX1 484 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 NCMAPQ5T1S8 102 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MRPL2Q5T653 305 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 LIPNQ5VXI9 398 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 GLIPR1L1Q6UWM5 242 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 C1orf105O95561 183 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 C17orf78Q8N4C9 275 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 TEAD3Q99594 435 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 NAA50Q9GZZ1 169 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MMP26Q9NRE1 261 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MMP17Q9ULZ9 603 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 MMP24Q9Y5R2 645 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF260Q3ZCT1 412 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CALHM1Q8IU99 346 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 CPEB1Q9BZB8 566 aaKnown RBP7.36□□□□□ -1.23
SCN8A-201ENST00000354534 POLDIP2Q9Y2S7 368 aa7.36□□□□□ -1.23
SCN8A-201ENST00000354534 OPN1MWP04001 364 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 OPN1MW2P0DN77 364 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 OPN1MW3P0DN78 364 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 CD46P15529 392 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 HIST1H1CP16403 213 aaKnown RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 FDXRP22570 491 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 OR2I1PQ8NGU4 316 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 CSNK1G1Q9HCP0 422 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SCN3AQ9NY46 2000 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SLX4Q8IY92 1834 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 ELOA3CA0A087WX78 387 aaPredicted RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 TRBV4-1A0A0J9YWV2 114 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 WTIPA6NIX2 430 aaPredicted RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 VNN1O95497 513 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 IL5P05113 134 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 OPRK1P41145 380 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 FAM71E1Q6IPT2 247 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SLC17A4Q9Y2C5 497 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 LIPAP38571 399 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 TIAL1Q01085 375 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 ELAVL3Q14576 367 aaKnown RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SMN1Q16637 294 aaKnown RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 NXNL2Q5VZ03 156 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SIRT6Q8N6T7 355 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SLC38A5Q8WUX1 472 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 TECRQ9NZ01 308 aaKnown RBP7.35□□□□□ -1.23
SCN8A-201ENST00000354534 IGHV3-64DA0A0J9YX35 117 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 GPR32O75388 356 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 POU2F2P09086 479 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 PLPP6Q8IY26 295 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 SCMH1Q96GD3 660 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 TMEM147Q9BVK8 224 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 ARFGEF2Q9Y6D5 1785 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 CTSAP10619 480 aa7.35□□□□□ -1.23
SCN8A-201ENST00000354534 CR2P20023 1033 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms