RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TMED6Q8WW62 240 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 LIN37Q96GY3 246 aaPredicted RBP14.46□□□□□ -0.09
PTPN11-201ENST00000351677 MBD1Q9UIS9 605 aaPredicted RBP14.46□□□□□ -0.09
PTPN11-201ENST00000351677 HSPB2A8KAH6 182 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 HPNP05981 417 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 COL9A1P20849 921 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 DRD3P35462 400 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 HSPB2Q16082 182 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 SSX1Q16384 188 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 TIGD3Q6B0B8 471 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 RELL2Q8NC24 303 aaPredicted RBP14.46□□□□□ -0.09
PTPN11-201ENST00000351677 NEU3Q9UQ49 428 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 PRELID3BQ9Y3B1 194 aa14.46□□□□□ -0.09
PTPN11-201ENST00000351677 NME2P1O60361 137 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 PTHLHP12272 177 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 PPIAP62937 165 aaKnown RBP14.46□□□□□ -0.1
PTPN11-201ENST00000351677 LHFPL2Q6ZUX7 228 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 KMT5CQ86Y97 462 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 OR13C8Q8NGS7 320 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 DAZAP1Q96EP5 407 aaKnown RBP14.46□□□□□ -0.1
PTPN11-201ENST00000351677 DOCK5Q9H7D0 1870 aa14.46□□□□□ -0.1
PTPN11-201ENST00000351677 SIRPB1O00241 398 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 TBX19O60806 448 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 PRICKLE4Q2TBC4 344 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ZNF468Q5VIY5 522 aaPredicted RBP14.45□□□□□ -0.1
PTPN11-201ENST00000351677 SPEM1Q8N4L4 309 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 LRP12Q9Y561 859 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 A0A1B0GUH1 482 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ANKUB1A6NFN9 424 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OR2F2O95006 317 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OR2F1Q13607 317 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 SLC16A12Q6ZSM3 486 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OR2AK2Q8NG84 335 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 APH1BQ8WW43 257 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OR2A5Q96R48 311 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 TUBG2Q9NRH3 451 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 IGHV5-51A0A0C4DH38 117 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 RAB4AP20338 218 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 SDHBP21912 280 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 RAB11AP62491 216 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ZNF117Q03924 483 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 LINC00303Q3SY05 128 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ANKRD16Q6P6B7 361 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 MFSD4AQ8N468 514 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 SMIM4Q8WVI0 70 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 CELA2BP08218 269 aaPredicted RBP14.45□□□□□ -0.1
PTPN11-201ENST00000351677 PSMB6P28072 239 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 FZD2Q14332 565 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ACOT7LQ6ZUV0 252 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 UHRF2Q96PU4 802 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 NIPSNAP3BQ9BS92 247 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ARPC4-TTLL3A0A0A6YYG9 625 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 TAGLN2P37802 199 aaKnown RBP14.45□□□□□ -0.1
PTPN11-201ENST00000351677 MMP15P51511 669 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 PPP1CAP62136 330 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OR2B11Q5JQS5 317 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ZNF808Q8N4W9 903 aaPredicted RBP14.45□□□□□ -0.1
PTPN11-201ENST00000351677 OTOSQ8NHW6 89 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 C11orf40Q8WZ69 217 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 ZNF416Q9BWM5 594 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 MMP25Q9NPA2 562 aa14.45□□□□□ -0.1
PTPN11-201ENST00000351677 DNAJB12Q9NXW2 375 aaKnown RBP14.45□□□□□ -0.1
PTPN11-201ENST00000351677 SCAF4O95104 1147 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 SLC10A1Q14973 349 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 H3F3CQ6NXT2 135 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 NLRC3Q7RTR2 1065 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 SIRT3Q9NTG7 399 aaPredicted RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 ASCC3Q8N3C0 2202 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 XRCC3O43542 346 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 FAM157BP0CG42 384 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 HTRA4P83105 476 aaPredicted RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 AVPI1Q5T686 147 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 TMEM92Q6UXU6 159 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 DND1Q8IYX4 353 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 SCCPDHQ8NBX0 429 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 OR52H1Q8NGJ2 320 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 FOCADQ5VW36 1801 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 ATF1P18846 271 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 AGFG1P52594 562 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 EXOSC2Q13868 293 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 TOR2AQ5JU69 321 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 TRIB1Q96RU8 372 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 PIGMQ9H3S5 423 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 TMEM231Q9H6L2 316 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 NUP214P35658 2090 aaPredicted RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 MCCD1P59942 119 aaPredicted RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 FAM122BQ7Z309 247 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 RBMXL3Q8N7X1 1067 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 TCEAL7Q9BRU2 100 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 YBX2Q9Y2T7 364 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 FAHP16930 419 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 GZMKP49863 264 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 SNTB1Q13884 538 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 ZNF687Q8N1G0 1237 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 RBM38Q9H0Z9 239 aaKnown RBP14.44□□□□□ -0.1
PTPN11-201ENST00000351677 CYSLTR2Q9NS75 346 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 URGCP-MRPS24S4R325 110 aa14.44□□□□□ -0.1
PTPN11-201ENST00000351677 DHHO43323 396 aa14.43□□□□□ -0.1
PTPN11-201ENST00000351677 PCMT1P22061 227 aa14.43□□□□□ -0.1
PTPN11-201ENST00000351677 GPR3P46089 330 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms