RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 A0A1B0GTH9 108 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 K7EPK0 472 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SERPINA2P20848 420 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 FCARP24071 287 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 LMO1P25800 156 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 GABRA4P48169 554 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 CAMLGP49069 296 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 POLR2HP52434 150 aaKnown RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ACTA2P62736 377 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ACTG2P63267 376 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 DECR1Q16698 335 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM229BQ8NBD8 167 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 OR52N4Q8NGI2 321 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 FAM83CQ9BQN1 747 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 OR2J1Q9GZK6 312 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 PDE7BQ9NP56 450 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 SIDT1Q9NXL6 827 aaKnown RBP9.56□□□□□ -0.88
CAPN3-203ENST00000349748 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CAPN3-203ENST00000349748 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM238C9JI98 176 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 CSRP1P21291 193 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 RAB7AP51149 207 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 SLC22A6Q4U2R8 563 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 ZNF100Q8IYN0 542 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 OR1P1Q8NH06 330 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 MCHR1Q99705 422 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 SLC17A5Q9NRA2 495 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 FBXL17Q9UF56 701 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 PCDHB8Q9UN66 801 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 ICKQ9UPZ9 632 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 NKX6-3A6NJ46 265 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 PRR32B1ATL7 298 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 HCRTR2O43614 444 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 CST4P01036 141 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 PRH1P02810 166 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 APODP05090 189 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 FUT3P21217 361 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 CLDN2P57739 230 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 MRPL58Q14197 206 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 LASP1Q14847 261 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 OR4C11Q6IEV9 310 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 SLCO4C1Q6ZQN7 724 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 MRPL41Q8IXM3 137 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 LYG1Q8N1E2 194 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 C17orf78Q8N4C9 275 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 OR10AC1Q8NH08 325 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 ZNRF4Q8WWF5 429 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 TSLPQ969D9 159 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 CD180Q99467 661 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 CUTCQ9NTM9 273 aa9.55□□□□□ -0.88
CAPN3-203ENST00000349748 ZCCHC3Q9NUD5 404 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 USP36Q9P275 1121 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
CAPN3-203ENST00000349748 KIR2DL5BA0A0G2JN68 375 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 KIR2DL5BA0A0G2JPC4 375 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 FITM1A5D6W6 292 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 M0QZ24 198 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 EIF1AYO14602 144 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 KDELR3O43731 214 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 LCATP04180 440 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SLC35G6P0C7Q6 338 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 TACR2P21452 398 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 CHRNB4P30926 498 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 WNT5AP41221 380 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 EIF1AXP47813 144 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 PMS2P11Q13670 270 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 P2RY6Q15077 328 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SLC9A3R2Q15599 337 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 PRAMEF14Q5SWL7 426 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 ABLIM2Q6H8Q1 611 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SLC35F2Q8IXU6 374 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 KIR2DL5AQ8N109 375 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR2L13Q8N349 312 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 ADPRHL1Q8NDY3 354 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR4X1Q8NH49 305 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 KLK13Q9UKR3 277 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 YBX2Q9Y2T7 364 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 ZFP37Q9Y6Q3 630 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 SPTBP11277 2137 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 TRBV11-1A0A0K0K1C0 115 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 A0A1B0GVT2 93 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 TMEM202A6NGA9 273 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 A6NIZ1 184 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 GPRIN2O60269 458 aa9.54□□□□□ -0.88
CAPN3-203ENST00000349748 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
CAPN3-203ENST00000349748 HPRT1P00492 218 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms