RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 BPNT1O95861 308 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 TGM6O95932 706 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 IL2RAP01589 272 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 IGLV1-44P01699 117 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 APOA1P02647 267 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 TMIGD3P0DMS9 266 aaPredicted RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 KLK2P20151 261 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 BMXP51813 675 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 PPP5CP53041 499 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 DCTN2Q13561 401 aaKnown RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 OR8B8Q15620 311 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 SLC25A35Q3KQZ1 300 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 CEP78Q5JTW2 689 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 SAXO1Q8IYX7 474 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 RPL3LQ92901 407 aaKnown RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 RELTQ969Z4 430 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 APOBEC3DQ96AK3 386 aaPredicted RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 ZNF75AQ96N20 296 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 TMED9Q9BVK6 235 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 SEBOXQ9HB31 216 aaPredicted RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 TCF7L1Q9HCS4 588 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 EXOSC4Q9NPD3 245 aaKnown RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 FBXO9Q9UK97 447 aaPredicted RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 RAXQ9Y2V3 346 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 PMF1-BGLAPU3KQ54 211 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 LOC100506127A0A0U1RQW1 187 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 M0R135 149 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 DOK2O60496 412 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 TNFSF13O75888 250 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 APOL3O95236 402 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 HLA-DQB1P01920 261 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 ITGA5P08648 1049 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 NTF4P34130 210 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 CASP6P55212 293 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 PITPNAQ00169 270 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 SLC3A1Q07837 685 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 GABRA6Q16445 453 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 CARD17Q5XLA6 110 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 RTL6Q6ICC9 239 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 OR5D14Q8NGL3 314 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 OR6M1Q8NGM8 313 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 TRMT61AQ96FX7 289 aaKnown RBP6.27□□□□□ -1.41
NUP43-201ENST00000340413 ZNF799Q96GE5 643 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 DMRTA2Q96SC8 542 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 V9GY05 133 aa6.27□□□□□ -1.41
NUP43-201ENST00000340413 LOC107986453A0A1B0GWG9 222 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 F10P00742 488 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 CST4P01036 141 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ACAA1P09110 424 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 EPXP11678 715 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PRKACBP22694 351 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 THBS2P35442 1172 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PMELP40967 661 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 CXADRP78310 365 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PSG4Q00888 419 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PMP22Q01453 160 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ARL6IP1Q15041 203 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 UBE2NLQ5JXB2 153 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 SFXN4Q6P4A7 337 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 SKA3Q8IX90 412 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 C9orf106Q8NAJ2 232 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 OR14K1Q8NGZ2 314 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 METTL17Q9H7H0 456 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 EMC7Q9NPA0 242 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PCDHB16Q9NRJ7 776 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 IL36GQ9NZH8 169 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZNF224Q9NZL3 707 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 CGGBP1Q9UFW8 167 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 FAM171A2A8MVW0 826 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 H0YC42 278 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 SLC17A2O00624 439 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 GSTZ1O43708 216 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 CA11O75493 328 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 OCM2P0CE71 109 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 MFGE8Q08431 387 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 CNN3Q15417 329 aaKnown RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 B3GLCTQ6Y288 498 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 SLC22A4Q9H015 551 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 STEAP1Q9UHE8 339 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 FAM215AQ9Y5M1 114 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 MPZL1O95297 269 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 IGKV3-15P01624 115 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZNF32P17041 273 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 MAP2K3P46734 347 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 HCCSP53701 268 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZNF121P58317 390 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 SRYQ05066 204 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 LYPD4Q6UWN0 246 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ASCL4Q6XD76 172 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 STAC2Q6ZMT1 411 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZNF283Q8N7M2 679 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 ZSCAN4Q8NAM6 433 aaPredicted RBP6.26□□□□□ -1.41
NUP43-201ENST00000340413 OR8B12Q8NGG6 310 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 STARD4Q96DR4 205 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 LRRC46Q96FV0 321 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 PGAM5Q96HS1 289 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 POM121L2Q96KW2 1035 aa6.26□□□□□ -1.41
NUP43-201ENST00000340413 C7orf50Q9BRJ6 194 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms