RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NAAAQ02083 359 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 EIF2B1Q14232 305 aaKnown RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 TESK1Q15569 626 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 CLEC12AQ5QGZ9 265 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 SYT6Q5T7P8 510 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF322Q6U7Q0 402 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 LINGO2Q7L985 606 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 KRT77Q7Z794 578 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 LINC00596Q86U02 117 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ELMOD2Q8IZ81 293 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 GALNT4Q8N4A0 578 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF611Q8N823 705 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 NKAIN3Q8N8D7 197 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF485Q8NCK3 441 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 SLC30A7Q8NEW0 376 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF420Q8TAQ5 688 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 NEU4Q8WWR8 484 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 PPP1R14AQ96A00 147 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF416Q9BWM5 594 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 OPN3Q9H1Y3 402 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ACOT13Q9NPJ3 140 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 BATF3Q9NR55 127 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF224Q9NZL3 707 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 GHRLQ9UBU3 117 aa2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 LSM2Q9Y333 95 aaKnown RBP2.85□□□□□ -1.95
SCAMP1-201ENST00000320280 TUBAL3A6NHL2 446 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 TRIM64BA6NI03 449 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 OR5B21A6NL26 309 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 A6NNC1 897 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 LRRN3E7EW58 273 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 GMFGO60234 142 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SCGNO76038 276 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 AGFG2O95081 481 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 IGHV3-13P01766 116 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 TFP02787 698 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SCG5P05408 212 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 HTR1AP08908 422 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SPARCP09486 303 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 NR4A1P22736 598 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CD40P25942 277 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 STOMP27105 288 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 LOXP28300 417 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CCKARP32238 428 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 RPS7P62081 194 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 RAB1AP62820 205 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 PSG4Q00888 419 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SLC3A1Q07837 685 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 FOXF2Q12947 444 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CNN3Q15417 329 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF718Q3SXZ3 478 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 PHYHD1Q5SRE7 291 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CD200R1LQ6Q8B3 271 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 PRSS57Q6UWY2 283 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 FJX1Q86VR8 437 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 TPRA1Q86W33 373 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ERI1Q8IV48 349 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SKA3Q8IX90 412 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZSCAN4Q8NAM6 433 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF540Q8NDQ6 660 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 OR6N2Q8NGY6 317 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 GGHQ92820 318 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SPSB1Q96BD6 273 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SMIM19Q96E16 107 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ALKBH3Q96Q83 286 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 NUDT16L1Q9BRJ7 211 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF649Q9BS31 505 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 MED18Q9BUE0 208 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ABHD6Q9BV23 337 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ALG8Q9BVK2 526 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 HCAR1Q9BXC0 346 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 DNTTIP1Q9H147 329 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 RNF121Q9H920 327 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 AP5S1Q9NUS5 200 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 FAM206AQ9NX38 181 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 IGHV2OR16-5A0A0B4J2B6 119 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 TRBV5-5A0A0J9YX44 114 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 EEF1E1-BLOC1S5C9J1V9 151 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 M0R135 149 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 NDUFS8O00217 210 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 EEF1E1O43324 174 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ATE1O95260 518 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 UBBP0CG47 229 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF32P17041 273 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 BMP5P22003 454 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 PRKACBP22694 351 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 GABRA5P31644 462 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 APOBEC3AP31941 199 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CFHR2P36980 270 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CD200P41217 278 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 SIRPAP78324 504 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF85Q03923 595 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 RUNX1T1Q06455 604 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ALKBH1Q13686 389 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 CDK5R1Q15078 307 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 TAF13Q15543 124 aa2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 ZNF672Q499Z4 452 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-201ENST00000320280 AGAP6Q5VW22 663 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms