RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 OR4K17Q8NGC6 315 aa12□□□□□ -0.49
SKA3-202ENST00000314759 STOML3Q8TAV4 291 aa12□□□□□ -0.49
SKA3-202ENST00000314759 FAM46BQ96A09 425 aa12□□□□□ -0.49
SKA3-202ENST00000314759 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
SKA3-202ENST00000314759 RAB22AQ9UL26 194 aa12□□□□□ -0.49
SKA3-202ENST00000314759 CSAG2Q9Y5P2 127 aa12□□□□□ -0.49
SKA3-202ENST00000314759 C5orf51A6NDU8 294 aa12□□□□□ -0.49
SKA3-202ENST00000314759 DUS4LO95620 317 aaKnown RBP12□□□□□ -0.49
SKA3-202ENST00000314759 FAM157CP0CG43 387 aa12□□□□□ -0.49
SKA3-202ENST00000314759 GALNSP34059 522 aa12□□□□□ -0.49
SKA3-202ENST00000314759 AKR1C3P42330 323 aa12□□□□□ -0.49
SKA3-202ENST00000314759 FAHD2BQ6P2I3 314 aaPredicted RBP12□□□□□ -0.49
SKA3-202ENST00000314759 RTN4RL2Q86UN3 420 aa12□□□□□ -0.49
SKA3-202ENST00000314759 FAM219AQ8IW50 185 aa12□□□□□ -0.49
SKA3-202ENST00000314759 KDM8Q8N371 416 aa12□□□□□ -0.49
SKA3-202ENST00000314759 ADIPOR1Q96A54 375 aa12□□□□□ -0.49
SKA3-202ENST00000314759 FAHD2AQ96GK7 314 aa12□□□□□ -0.49
SKA3-202ENST00000314759 SLC46A1Q96NT5 459 aa12□□□□□ -0.49
SKA3-202ENST00000314759 GAL3ST4Q96RP7 486 aa12□□□□□ -0.49
SKA3-202ENST00000314759 RNF126Q9BV68 326 aa12□□□□□ -0.49
SKA3-202ENST00000314759 SEC11CQ9BY50 192 aa12□□□□□ -0.49
SKA3-202ENST00000314759 HRH4Q9H3N8 390 aa12□□□□□ -0.49
SKA3-202ENST00000314759 NIT2Q9NQR4 276 aa12□□□□□ -0.49
SKA3-202ENST00000314759 CYTL1Q9NRR1 136 aa12□□□□□ -0.49
SKA3-202ENST00000314759 TINAGQ9UJW2 476 aa12□□□□□ -0.49
SKA3-202ENST00000314759 FRG2CA6NGY1 282 aa12□□□□□ -0.49
SKA3-202ENST00000314759 DBX1A6NMT0 343 aa12□□□□□ -0.49
SKA3-202ENST00000314759 P2RY10O00398 339 aa12□□□□□ -0.49
SKA3-202ENST00000314759 NPIPB7O75200 414 aa12□□□□□ -0.49
SKA3-202ENST00000314759 HLA-DOBP13765 273 aa12□□□□□ -0.49
SKA3-202ENST00000314759 MUC1P15941 1255 aaPredicted RBP12□□□□□ -0.49
SKA3-202ENST00000314759 SERPINF1P36955 418 aa12□□□□□ -0.49
SKA3-202ENST00000314759 ZP2Q05996 745 aa12□□□□□ -0.49
SKA3-202ENST00000314759 PGAP1Q75T13 922 aa12□□□□□ -0.49
SKA3-202ENST00000314759 SLC29A4Q7RTT9 530 aa12□□□□□ -0.49
SKA3-202ENST00000314759 TMPRSS9Q7Z410 1059 aa12□□□□□ -0.49
SKA3-202ENST00000314759 LINC00346Q8IVM7 164 aa12□□□□□ -0.49
SKA3-202ENST00000314759 BAP18Q8IXM2 172 aa12□□□□□ -0.49
SKA3-202ENST00000314759 NKAIN3Q8N8D7 197 aa12□□□□□ -0.49
SKA3-202ENST00000314759 SLC30A7Q8NEW0 376 aa12□□□□□ -0.49
SKA3-202ENST00000314759 ROBO4Q8WZ75 1007 aa12□□□□□ -0.49
SKA3-202ENST00000314759 DCUN1D4Q92564 292 aa12□□□□□ -0.49
SKA3-202ENST00000314759 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TEX13DA0A0J9YY54 714 aaPredicted RBP11.99□□□□□ -0.49
SKA3-202ENST00000314759 TMEM269A0A1B0GVZ9 245 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 PLPP3O14495 311 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 GNB3P16520 340 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 CD1CP29017 333 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 DCXRQ7Z4W1 244 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TMEM151BQ8IW70 566 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 OR52N4Q8NGI2 321 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 OR6S1Q8NH40 331 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 FGGYQ96C11 551 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 BCL2L14Q9BZR8 327 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 OR11A1Q9GZK7 315 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 A0A1W2PPE3 182 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 B4DGG1 531 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 HEXAP06865 529 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
SKA3-202ENST00000314759 QRFPP83859 136 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 ECH1Q13011 328 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 AIMP2Q13155 320 aaKnown RBP11.99□□□□□ -0.49
SKA3-202ENST00000314759 PEA15Q15121 130 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 COL13A1Q5TAT6 717 aaPredicted RBP11.99□□□□□ -0.49
SKA3-202ENST00000314759 TMEM92Q6UXU6 159 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TMEM200AQ86VY9 491 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 MISPQ8IVT2 679 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 NUBPLQ8TB37 319 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 ST7LQ8TDW4 575 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 RNF141Q8WVD5 230 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TCTN2Q96GX1 697 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 NRIP2Q9BQI9 281 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 LANCL2Q9NS86 450 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 RCC2Q9P258 522 aaKnown RBP11.99□□□□□ -0.49
SKA3-202ENST00000314759 HS3ST3A1Q9Y663 406 aa11.99□□□□□ -0.49
SKA3-202ENST00000314759 TRBV6-7A0A0A0MS04 114 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 TMED7-TICAM2A0A0A6YYA0 188 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 H0YIZ8 118 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 PMP2P02689 132 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 GP1BBP13224 206 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 CRABP1P29762 137 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 HTRA3P83110 453 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 FMODQ06828 376 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 ELAVL1Q15717 326 aaKnown RBP11.98□□□□□ -0.49
SKA3-202ENST00000314759 C1orf140Q5VVS0 124 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 MARCH1Q8TCQ1 289 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 TSLPQ969D9 159 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 PTGES2Q9H7Z7 377 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 MMP26Q9NRE1 261 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 RP1P56715 2156 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 MSGN1A6NI15 193 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 SSX5O60225 188 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 IGKV3-11P04433 115 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 RABIFP47224 123 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 GABRA4P48169 554 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 PPT1P50897 306 aa11.98□□□□□ -0.49
SKA3-202ENST00000314759 PJVKQ0ZLH3 352 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms