RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 WSB2Q9NYS7 404 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ABCD4O14678 606 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CALCBP10092 127 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 RPL11P62913 178 aaKnown RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GABARAPL1Q9H0R8 117 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CBLN4Q9NTU7 201 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 PLCE1Q9P212 2302 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 PIGPP57054 158 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 C9orf135Q5VTT2 229 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CARFQ8N187 725 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CTSFQ9UBX1 484 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ABCA4P78363 2273 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OPN1MWP04001 364 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OPN1MW2P0DN77 364 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OPN1MW3P0DN78 364 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GCSHP23434 173 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OR10J1P30954 320 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 CSN1S1P47710 185 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 RAC1P63000 192 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 PIANPQ8IYJ0 282 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 HES4Q9HCC6 221 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 LPAR3Q9UBY5 353 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 SULT1A1P50225 295 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 DOC2BQ14184 412 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF77Q15935 545 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 FAM27D1Q5T7N8 215 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 UBE3DQ7Z6J8 389 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OR4C46A6NHA9 309 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 TMIGD3P0DMS9 266 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GPM6BQ13491 265 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 SSX1Q16384 188 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 NAXDQ8IW45 347 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OPN3Q9H1Y3 402 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ARFGAP1Q8N6T3 406 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 OLIG1Q8TAK6 271 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 SUSD3Q96L08 255 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 WNT6Q9Y6F9 365 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 A0A0A6YYC8 382 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 I3L1I5 382 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 Q56UQ5 140 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ANKRD16Q6P6B7 361 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 TMEM179BQ7Z7N9 219 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 KLK11Q9UBX7 282 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 PLEKHB1Q9UF11 243 aaPredicted RBP10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 GJE1A6NN92 205 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 CA12O43570 354 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 CSN3P07498 182 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC6A8P48029 635 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 PCYT2Q99447 389 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 C1QTNF3Q9BXJ4 246 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 C17orf105B2RV13 164 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 EFSO43281 561 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF737O75373 536 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 LAG3P18627 525 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF140P52738 457 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 GPR37O15354 613 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 DND1Q8IYX4 353 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 OR2T10Q8NGZ9 312 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 NUBPLQ8TB37 319 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 HSD17B13Q7Z5P4 300 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 IL22RA1Q8N6P7 574 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 SPACA5Q96QH8 159 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 TRIB1Q96RU8 372 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 PSENENQ9NZ42 101 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 DLK1P80370 383 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 MUC20Q8N307 709 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 LMF2Q9BU23 707 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 CEBPDP49716 269 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 SPATA45Q537H7 98 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 SMIM4Q8WVI0 70 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 ADOQ96SZ5 270 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 PECRQ9BY49 303 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 CLDN34H7C241 214 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 HAND1O96004 215 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 TBPP20226 339 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 LMAN2Q12907 356 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 MFSD12Q6NUT3 480 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 YIPF1Q9Y548 306 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 MEIKINA0A087WXM9 373 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 OR10G3Q8NGC4 313 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 NUDT16L1Q9BRJ7 211 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 NEURL1O76050 574 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 PIPP12273 146 aaPredicted RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 COX5AP20674 150 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 CNN1P51911 297 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 RUNX2Q13950 521 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 TAS1R3Q7RTX0 852 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 RBM45Q8IUH3 476 aaKnown RBP10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 PITPNC1Q9UKF7 332 aa10.74□□□□□ -0.69
SHROOM3-201ENST00000296043 OR5B21A6NL26 309 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms