RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TUBA4AP68366 448 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 CRMP1Q14194 572 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 STEAP3Q658P3 488 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 B3GNT6Q6ZMB0 384 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 OR13C3Q8NGS6 347 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 ROBO4Q8WZ75 1007 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 KISS1RQ969F8 398 aaPredicted RBP7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 APH1AQ96BI3 265 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 SIGLEC11Q96RL6 698 aa7.45□□□□□ -1.22
PTPDC1-201ENST00000288976 PHYHO14832 338 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 ENTPD6O75354 484 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC2A10O95528 541 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 CRYBA1P05813 215 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 FAM157BP0CG42 384 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 NR1H2P55055 460 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 MELKQ14680 651 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 ALKBH6Q3KRA9 238 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 TEX30Q5JUR7 227 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 BTLAQ7Z6A9 289 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 CDH24Q86UP0 819 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 CPOQ8IVL8 374 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 NMNAT3Q96T66 252 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PHB2Q99623 299 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 HDHD5Q9BXW7 423 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 DUSP21Q9H596 190 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 LPAR2Q9HBW0 351 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 DIMT1Q9UNQ2 313 aaKnown RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 A0A1W2PR80 420 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 OR6C68A6NDL8 312 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 M0R129 80 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 RAB27BO00194 218 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 RAMP1O60894 148 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF780AO75290 641 aaPredicted RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 IGHA1P01876 353 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 RAC2P15153 192 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 TTKP33981 857 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM211Q6ICI0 200 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 ANKRD16Q6P6B7 361 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF709Q8N972 641 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 KCTD7Q96MP8 289 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PIGMQ9H3S5 423 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 GPN1Q9HCN4 374 aaPredicted RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PTTG3PQ9NZH4 202 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 KCNN3Q9UGI6 736 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 EXOSC1Q9Y3B2 195 aaKnown RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 C2CD3Q4AC94 2353 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 IGHV3-15A0A0B4J1V0 119 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 A0A1B0GV50 99 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 M0R1B8 84 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 CDRT1O95170 752 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PITPNBP48739 271 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 RAB2AP61019 212 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 VBP1P61758 197 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC35A2P78381 396 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 DMRTC1Q5HYR2 192 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 LIPKQ5VXJ0 399 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC18B1Q6NT16 456 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PRSS48Q7RTY5 328 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 FJX1Q86VR8 437 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 HAVCR2Q8TDQ0 301 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 PTP4A1Q93096 173 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 RFT1Q96AA3 541 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 SAT2Q96F10 170 aaPredicted RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 SFXN3Q9BWM7 321 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 B9D1Q9UPM9 204 aa7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 C14orf166Q9Y224 244 aaKnown RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 UBE2J1Q9Y385 318 aaPredicted RBP7.44□□□□□ -1.22
PTPDC1-201ENST00000288976 HSPB2A8KAH6 182 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 AQP8O94778 261 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 DIRAS3O95661 229 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 AMY2BP19961 511 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 KLK2P20151 261 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 EPHA1P21709 976 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CEACAM8P31997 349 aaPredicted RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 PSMB10P40306 273 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 AP3S2P59780 193 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ARF1P84077 181 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ROR2Q01974 943 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF91Q05481 1191 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 APOFQ13790 326 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 EIF2B1Q14232 305 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 HSPB2Q16082 182 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 BCL2L15Q5TBC7 163 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 PLCXD3Q63HM9 321 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 RTL6Q6ICC9 239 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF773Q6PK81 442 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MOB3CQ70IA8 216 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 DPPA2Q7Z7J5 298 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ACBD7Q8N6N7 88 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CNN2Q99439 309 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CDCA4Q9BXL8 241 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 GLTPQ9NZD2 209 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 A0A1W2PRD5 423 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 A0A1W2PRF3 423 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 A0A1W2PRM7 423 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF587BE7ETH6 402 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CRTAPO75718 401 aaPredicted RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 HLA-DPB1P04440 258 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CDK1P06493 297 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms