RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ROBO4Q8WZ75 1007 aa17.02■□□□□ 0.32
BRAF-201ENST00000288602 SEC22CQ9BRL7 303 aa17.02■□□□□ 0.32
BRAF-201ENST00000288602 NAA11Q9BSU3 229 aaPredicted RBP17.02■□□□□ 0.32
BRAF-201ENST00000288602 MEGF11A6BM72 1044 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 OR5H15A6NDH6 313 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 NAP1L6A6NFF2 107 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 SERPINA7P05543 415 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 GTF2F2P13984 249 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 ZNF17P17021 662 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 SRD5A2P31213 254 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 H3F3CQ6NXT2 135 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 ADGRE4PQ86SQ3 457 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 TMEM123Q8N131 208 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 DDA1Q9BW61 102 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 ACTR6Q9GZN1 396 aa17.02■□□□□ 0.31
BRAF-201ENST00000288602 F5H5K5 113 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 CD37P11049 281 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 GUCA1AP43080 201 aaPredicted RBP17.01■□□□□ 0.31
BRAF-201ENST00000288602 CD276Q5ZPR3 534 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.01■□□□□ 0.31
BRAF-201ENST00000288602 TMEM54Q969K7 222 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 SORCS2Q96PQ0 1159 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 LOC400499M0QZD8 3231 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 LOC390937A0A1W2PQ73 354 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 CD3DP04234 171 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 MSR1P21757 451 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 KCNMB1Q16558 191 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 ELFN2Q5R3F8 820 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 C1orf100Q5SVJ3 147 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 LAMTOR1Q6IAA8 161 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 GGNQ86UU5 652 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 CMBLQ96DG6 245 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 SFXN2Q96NB2 322 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 NELFAQ9H3P2 528 aa17.01■□□□□ 0.31
BRAF-201ENST00000288602 ARPC4-TTLL3A0A0A6YYG9 625 aa17■□□□□ 0.31
BRAF-201ENST00000288602 LDLRAD4O15165 306 aa17■□□□□ 0.31
BRAF-201ENST00000288602 CXCL13O43927 109 aa17■□□□□ 0.31
BRAF-201ENST00000288602 VAMP5O95183 116 aa17■□□□□ 0.31
BRAF-201ENST00000288602 GDF1P27539 372 aa17■□□□□ 0.31
BRAF-201ENST00000288602 RAG2P55895 527 aa17■□□□□ 0.31
BRAF-201ENST00000288602 CARD18P57730 90 aa17■□□□□ 0.31
BRAF-201ENST00000288602 PMPCAQ10713 525 aa17■□□□□ 0.31
BRAF-201ENST00000288602 ENDOGQ14249 297 aaKnown RBP17■□□□□ 0.31
BRAF-201ENST00000288602 OR5D14Q8NGL3 314 aa17■□□□□ 0.31
BRAF-201ENST00000288602 ZFAND1Q8TCF1 268 aa17■□□□□ 0.31
BRAF-201ENST00000288602 NABP1Q96AH0 204 aa17■□□□□ 0.31
BRAF-201ENST00000288602 HES7Q9BYE0 225 aa17■□□□□ 0.31
BRAF-201ENST00000288602 TMEM138Q9NPI0 162 aa17■□□□□ 0.31
BRAF-201ENST00000288602 SLC17A5Q9NRA2 495 aa17■□□□□ 0.31
BRAF-201ENST00000288602 LRFN1Q9P244 771 aa17■□□□□ 0.31
BRAF-201ENST00000288602 MT-CO3P00414 261 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 ZNF20P17024 532 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 SLC6A9P48067 706 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 ZP1P60852 638 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 PLXDC2Q6UX71 529 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 ZNF782Q6ZMW2 699 aaPredicted RBP16.99■□□□□ 0.31
BRAF-201ENST00000288602 PAQR4Q8N4S7 273 aaPredicted RBP16.99■□□□□ 0.31
BRAF-201ENST00000288602 NKAIN3Q8N8D7 197 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 SEH1LQ96EE3 360 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 LIN37Q96GY3 246 aaPredicted RBP16.99■□□□□ 0.31
BRAF-201ENST00000288602 ULBP2Q9BZM5 246 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 NIPAL2Q9H841 368 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 HSPB11Q9Y547 144 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 MED13Q9UHV7 2174 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 DHHO43323 396 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 GABRA1P14867 456 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 RAB3AP20336 220 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 CLDN15P56746 228 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 RTN4RL2Q86UN3 420 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 DTX1Q86Y01 620 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 LIX1LQ8IVB5 337 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 OR51S1Q8NGJ8 323 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 SIGLEC12Q96PQ1 595 aa16.99■□□□□ 0.31
BRAF-201ENST00000288602 FOXD3Q9UJU5 478 aaPredicted RBP16.99■□□□□ 0.31
BRAF-201ENST00000288602 TMEM235A6NFC5 223 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 WIPF3A6NGB9 483 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 PYCARD-AS1I3L0S3 204 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 ICMTO60725 284 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 DBHP09172 617 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 CD96P40200 585 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 RAC3P60763 192 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 UNC119Q13432 240 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 TNK1Q13470 666 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 POU4F3Q15319 338 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 C10orf128Q5T292 105 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 OR52B4Q8NGK2 314 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 LOXL4Q96JB6 756 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 ZFP64Q9NPA5 681 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 NDUFB6O95139 128 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 CSF1P09603 554 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 ANXA3P12429 323 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 TMEM164Q5U3C3 297 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 CDCP2Q5VXM1 449 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 OR11H4Q8NGC9 324 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 GPX8Q8TED1 209 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 ZNF845Q96IR2 970 aaPredicted RBP16.98■□□□□ 0.31
BRAF-201ENST00000288602 GINS4Q9BRT9 223 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 EDEM2Q9BV94 578 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 PCNX2A6NKB5 2137 aa16.98■□□□□ 0.31
BRAF-201ENST00000288602 GJE1A6NN92 205 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms