RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CX3CR1P49238 355 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 ASCL1P50553 236 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 WDR38Q5JTN6 314 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 IL17RDQ8NFM7 739 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 OR13C5Q8NGS8 318 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 G6PC2Q9NQR9 355 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 ESPL1Q14674 2120 aa16.45■□□□□ 0.22
PDLIM3-202ENST00000284770 RTTNQ86VV8 2226 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 C16orf97H3BN30 126 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 M0R135 149 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 SERPINA5P05154 406 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 CBR1P16152 277 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 STOMP27105 288 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 KIR3DL2P43630 455 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 TPTEP56180 551 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF121P58317 390 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 C1QTNF12Q5T7M4 302 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 RGP1Q92546 391 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF799Q96GE5 643 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 KCTD7Q96MP8 289 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 DACH2Q96NX9 599 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 USB1Q9BQ65 265 aaKnown RBP16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 ACTR6Q9GZN1 396 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 BRD7Q9NPI1 651 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 OR52A1Q9UKL2 312 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 GTF2A1LQ9UNN4 478 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 SLC22A13Q9Y226 551 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 GSTK1Q9Y2Q3 226 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 SLC25A15Q9Y619 301 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 PMF1-BGLAPU3KQ54 211 aa16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 KMT2BQ9UMN6 2715 aaPredicted RBP16.44■□□□□ 0.22
PDLIM3-202ENST00000284770 LOC100509620A0A075B734 347 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 ACOD1A6NK06 481 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 FBXL19-AS1Q494R0 122 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 DRAM2Q6UX65 266 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 PRSS45Q7RTY3 260 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 OR5AK2Q8NH90 309 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 PPP1R14AQ96A00 147 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 SLIRPQ9GZT3 109 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 MOB1AQ9H8S9 216 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF281Q9Y2X9 895 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 TMEM212A6NML5 194 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 IGKV3-15P01624 115 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 ACSM4P0C7M7 580 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF14P17017 642 aaPredicted RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 PAX7P23759 505 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 CCKARP32238 428 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 RPS19P39019 145 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 SLC6A9P48067 706 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 YIF1BQ5BJH7 314 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 NAA40Q86UY6 237 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 CA5BP1Q8WTZ4 195 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 MS4A3Q96HJ5 214 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 POM121L2Q96KW2 1035 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 PBOV1Q9GZY1 135 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 OR10A4Q9H209 315 aa16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 PPIL3Q9H2H8 161 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 MOV10Q9HCE1 1003 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 NUFIP1Q9UHK0 495 aaKnown RBP16.43■□□□□ 0.22
PDLIM3-202ENST00000284770 RELNP78509 3460 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 SHISA3A0PJX4 238 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 AGFG2O95081 481 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 SERPINA3P01011 423 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 SLC2A1P11166 492 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 APLNRP35414 380 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 DGUOKQ16854 277 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 BCL2L15Q5TBC7 163 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 ELMOD2Q8IZ81 293 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 FAM169BQ8N8A8 192 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 MUCL1Q96DR8 90 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 MED18Q9BUE0 208 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 COMMD4Q9H0A8 199 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 CCDC59Q9P031 241 aaKnown RBP16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 PCNX1Q96RV3 2341 aa16.42■□□□□ 0.22
PDLIM3-202ENST00000284770 C5orf49A4QMS7 147 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 IL1AP01583 271 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 ANXA2P07355 339 aaKnown RBP16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 HGFACQ04756 655 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 TAB1Q15750 504 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 UNQ9370/PRO34162Q6UXP9 181 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 FAM57BQ71RH2 274 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CEACAM19Q7Z692 300 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF676Q8N7Q3 588 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 SLC30A7Q8NEW0 376 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CRNNQ9UBG3 495 aaPredicted RBP16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CLPXO76031 633 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CDRT1O95170 752 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CCL2P13500 99 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 SDC2P34741 201 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 IDH3GP51553 393 aaPredicted RBP16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 CDSNQ15517 529 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 ODF4Q2M2E3 257 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 ZMAT1Q5H9K5 638 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 FAM27D1Q5T7N8 215 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 ZNF704Q6ZNC4 412 aaPredicted RBP16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 C1QTNF6Q9BXI9 259 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 SP140LQ9H930 580 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms