RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 FAM96BQ9Y3D0 163 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 THADAQ6YHU6 1953 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 SPTY2D1-AS1A0A0U1RR47 76 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 MSGN1A6NI15 193 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 SSX5O60225 188 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 ADAP1O75689 374 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 DUS4LO95620 317 aaKnown RBP24.51■■□□□ 1.51
CBX4-201ENST00000269397 DDAH2O95865 285 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 PLCXD2Q0VAA5 305 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 C9orf40Q8IXQ3 194 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 OR13C9Q8NGT0 318 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 C2CD4CQ8TF44 421 aa24.51■■□□□ 1.51
CBX4-201ENST00000269397 PRUNE2Q8WUY3 3088 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 CTAG1AP78358 180 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 SLC9A3R2Q15599 337 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 C12orf57Q99622 126 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 OR2S2Q9NQN1 319 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 MED29Q9NX70 200 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 H2BFMP0C1H6 154 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 CRABP1P29762 137 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 DHCR7Q9UBM7 475 aaKnown RBP24.5■■□□□ 1.51
CBX4-201ENST00000269397 HS3ST3A1Q9Y663 406 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 TMEM131Q92545 1883 aa24.5■■□□□ 1.51
CBX4-201ENST00000269397 TMEM150CB9EJG8 249 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 NPIPB7O75200 414 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 IGKV3-11P04433 115 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 GABRG2P18507 467 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 RAB6AP20340 208 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 NFYBP25208 207 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 NPY4RP50391 375 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 ZNF704Q6ZNC4 412 aaPredicted RBP24.49■■□□□ 1.51
CBX4-201ENST00000269397 ZFP82Q8N141 532 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 NKAIN3Q8N8D7 197 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 ARL11Q969Q4 196 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 CPAMD8Q8IZJ3 1885 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 A8MVM7 634 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 OR2T1O43869 369 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 ISG15P05161 165 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 POLR2HP52434 150 aaKnown RBP24.49■■□□□ 1.51
CBX4-201ENST00000269397 SLC26A5P58743 744 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 DMRTC1Q5HYR2 192 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 RAB11FIP2Q7L804 512 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 PTX4Q96A99 478 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 CYTL1Q9NRR1 136 aa24.49■■□□□ 1.51
CBX4-201ENST00000269397 TEX13DA0A0J9YY54 714 aaPredicted RBP24.48■■□□□ 1.51
CBX4-201ENST00000269397 ZNF217O75362 1048 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 AHSA1O95433 338 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 GABRA4P48169 554 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 TMEM244Q5VVB8 128 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 HLA-DQA1Q5Y7H0 255 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 OR4K15Q8NH41 348 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 ZNF705EA8MWA4 302 aaPredicted RBP24.48■■□□□ 1.51
CBX4-201ENST00000269397 F8VVB4 439 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 F8VWA3 439 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 RAB13P51153 203 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 EBPQ15125 230 aaKnown RBP24.48■■□□□ 1.51
CBX4-201ENST00000269397 AWAT2Q6E213 333 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 SPAG16Q8N0X2 631 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 CNTNAP3BQ96NU0 1288 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 LRRC61Q9BV99 259 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 HRH4Q9H3N8 390 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 ALG1L2C9J202 215 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 PRAMEF26H0Y7S4 382 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 FARS2O95363 451 aaKnown RBP24.48■■□□□ 1.51
CBX4-201ENST00000269397 CD79AP11912 226 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 ANGPTL5Q86XS5 388 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 ZNF101Q8IZC7 436 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 STOML3Q8TAV4 291 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 RNF141Q8WVD5 230 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 ARL5BQ96KC2 179 aa24.48■■□□□ 1.51
CBX4-201ENST00000269397 CMSS1Q9BQ75 279 aaKnown RBP24.48■■□□□ 1.51
CBX4-201ENST00000269397 DBX1A6NMT0 343 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 FOXL2P58012 376 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 QRFPP83859 136 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 SGCAQ16586 387 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 C16orf47Q6ZP98 133 aaPredicted RBP24.47■■□□□ 1.51
CBX4-201ENST00000269397 OR5AC2Q9NZP5 309 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 TTRP02766 147 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 CAPZBP47756 277 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 SMAD2Q15796 467 aaKnown RBP24.47■■□□□ 1.51
CBX4-201ENST00000269397 SLC30A7Q8NEW0 376 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 OR1M1Q8NGA1 313 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 EMC6Q9BV81 110 aa24.47■■□□□ 1.51
CBX4-201ENST00000269397 PHF3Q92576 2039 aaKnown RBP24.46■■□□□ 1.51
CBX4-201ENST00000269397 SYT7O43581 403 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 MTRF1O75570 445 aaKnown RBP24.46■■□□□ 1.51
CBX4-201ENST00000269397 ABCD3P28288 659 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 HOXA1P49639 335 aaPredicted RBP24.46■■□□□ 1.51
CBX4-201ENST00000269397 MICBQ29980 383 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 TMEM100Q9NV29 134 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 TSPAN2O60636 221 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 GALNSP34059 522 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 ZNF585AQ6P3V2 769 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 TMEM104Q8NE00 496 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 CYP8B1Q9UNU6 501 aa24.46■■□□□ 1.51
CBX4-201ENST00000269397 RTTNQ86VV8 2226 aa24.45■■□□□ 1.51
CBX4-201ENST00000269397 KCNJ3P48549 501 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 EMP2P54851 167 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 ZNF528Q3MIS6 628 aa24.45■■□□□ 1.5
CBX4-201ENST00000269397 SLC22A24Q8N4F4 322 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms