RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FN3KRPQ9HA64 309 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 OR52A1Q9UKL2 312 aa10.41□□□□□ -0.74
CLSTN3-201ENST00000266546 ALPK2Q86TB3 2170 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 ZNF705GA8MUZ8 300 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 BHLHE40O14503 412 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OGG1O15527 345 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 CELA2BP08218 269 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 PTAFRP25105 342 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 CD1CP29017 333 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 AKR1C3P42330 323 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 POU3F1Q03052 451 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 ANKRD16Q6P6B7 361 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 ANGPTL5Q86XS5 388 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SLX1AQ9BQ83 275 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 WFDC6Q9BQY6 131 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 RAB33BQ9H082 229 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR10A5Q9H207 317 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 UFSP2Q9NUQ7 469 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 VSX1Q9NZR4 365 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SH3BGRL2Q9UJC5 107 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 ALPK3Q96L96 1907 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 IGHV1OR21-1A0A087WYE8 117 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 TAAR5O14804 337 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SERPINA2P20848 420 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 HOXA1P49639 335 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 ATP1B3P54709 279 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 EGR3Q06889 387 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 IL10RAQ13651 578 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 NKAIN2Q5VXU1 208 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR11G2Q8NGC1 345 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 CMSS1Q9BQ75 279 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 JAM3Q9BX67 310 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 PTGES2Q9H7Z7 377 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 DHCR7Q9UBM7 475 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 BRINP1O60477 761 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 JTBO76095 146 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 CHRM2P08172 466 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 HOXD4P09016 255 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR13C7P0DN81 318 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 GABRR1P24046 479 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 HOXA6P31267 233 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 CX3CR1P49238 355 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 FBXW12Q6X9E4 464 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SKA3Q8IX90 412 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR4S1Q8NGB4 309 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 OR9K2Q8NGE7 335 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 MARCH1Q8TCQ1 289 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 TM4SF19Q96DZ7 209 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 SLC46A1Q96NT5 459 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 HAO2Q9NYQ3 351 aa10.4□□□□□ -0.74
CLSTN3-201ENST00000266546 IGKV1-8A0A0C4DH67 115 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 LOC107986453A0A1B0GWG9 222 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 DCTN6O00399 190 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 HRH1P35367 487 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 F2RL1P55085 397 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 MFGE8Q08431 387 aaPredicted RBP10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 IL34Q6ZMJ4 242 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 WDR88Q6ZMY6 472 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 OR2L13Q8N349 312 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 LURAP1Q96LR2 239 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 MENTQ9BUN1 341 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 KCNG2Q9UJ96 466 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 NXT1Q9UKK6 140 aaKnown RBP10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 VDAC3Q9Y277 283 aa10.4□□□□□ -0.75
CLSTN3-201ENST00000266546 TRAV36DV7A0A075B6V5 113 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A0B4J2E0 115 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A1B0GX12 115 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 MFSD2BA6NFX1 497 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 F5H5K5 113 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 CTAG2O75638 210 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF16P17020 682 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 PI3P19957 117 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 BLVRBP30043 206 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 GFERP55789 205 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 MELKQ14680 651 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 OTPQ5XKR4 325 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 UEVLDQ8IX04 471 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 PPP4R1LQ9P1A2 415 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC7A11Q9UPY5 501 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 R4GN57 208 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 COL6A6A6NMZ7 2263 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 PLXNA2O75051 1894 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 SHISA3A0PJX4 238 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF354AO60765 605 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 FOSL1P15407 271 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 EMDP50402 254 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 RPL18Q07020 188 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 KCNAB1Q14722 419 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 HLA-BQ31612 363 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC16A13Q7RTY0 426 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF695Q8IW36 515 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 OR5D18Q8NGL1 313 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms