RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 A0A087WZY1 265 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 C17orf105B2RV13 164 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 LMX1BO60663 402 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 MT-ND4LP03901 98 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 ZNF93P35789 620 aaPredicted RBP13.09□□□□□ -0.31
PRDM4-201ENST00000228437 RAP1AP62834 184 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 CTAG1AP78358 180 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 PHLDA2Q53GA4 152 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 SKA3Q8IX90 412 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 ABHD6Q9BV23 337 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 GAR1Q9NY12 217 aaKnown RBP13.09□□□□□ -0.31
PRDM4-201ENST00000228437 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
PRDM4-201ENST00000228437 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
PRDM4-201ENST00000228437 LOC285556D6RIA3 1793 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 ZNF749O43361 778 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 TIMP1P01033 207 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 CHATP28329 748 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 LPAR6P43657 344 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 ADAMTSL4Q6UY14 1074 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 URM1Q9BTM9 101 aaKnown RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 PATJQ8NI35 1801 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 CYTIPO60759 359 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 SLC34A2O95436 690 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 CD37P11049 281 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 ZNF84P51523 738 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 RPS21P63220 83 aaKnown RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 DHODHQ02127 395 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 DPTQ07507 201 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 MFGE8Q08431 387 aaPredicted RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 DGAT2L6Q6ZPD8 337 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 RAB7BQ96AH8 199 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 A0A087WUJ7 227 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 PHYHO14832 338 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 FKTNO75072 461 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 EML2O95834 649 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 CSTBP04080 98 aaKnown RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 PNMTP11086 282 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.32
PRDM4-201ENST00000228437 BHLHE23Q8NDY6 225 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 SLCO5A1Q9H2Y9 848 aa13.08□□□□□ -0.32
PRDM4-201ENST00000228437 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 AP4M1O00189 453 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ZNF264O43296 627 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 RAB5AP20339 215 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ZNF528Q3MIS6 628 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 DHRS11Q6UWP2 260 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ZSCAN4Q8NAM6 433 aaPredicted RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 HIST1H2BAQ96A08 127 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 MRPS28Q9Y2Q9 187 aaKnown RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 FAM221AA4D161 298 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 GSK3AP49840 483 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 FMODQ06828 376 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 TOMM20Q15388 145 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ZIC1Q15915 447 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 GPR157Q5UAW9 335 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 IL34Q6ZMJ4 242 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
PRDM4-201ENST00000228437 CXorf65A6NEN9 183 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 CYB5BO43169 146 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 PNPP00491 289 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 ITGB2P05107 769 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 FHITP49789 147 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 TMEM244Q5VVB8 128 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 PRSS35Q8N3Z0 413 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 OR52N4Q8NGI2 321 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 OR13C8Q8NGS7 320 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 C16orf52Q8NHV5 167 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 STACQ99469 402 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 OR10A5Q9H207 317 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 FBXL17Q9UF56 701 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 KNTC1P50748 2209 aa13.07□□□□□ -0.32
PRDM4-201ENST00000228437 PRSS38A1L453 326 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 F5H5K5 113 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 GPR37O15354 613 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 UPK3AO75631 287 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 AGBL4Q5VU57 503 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
PRDM4-201ENST00000228437 UNQ9370/PRO34162Q6UXP9 181 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 LRP11Q86VZ4 500 aa13.06□□□□□ -0.32
PRDM4-201ENST00000228437 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
PRDM4-201ENST00000228437 OR5D14Q8NGL3 314 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms