RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Oasl1Q8VI94 511 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 EsamQ925F2 394 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Mrpl49Q9CQ40 166 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Chmp1b2Q9CQD4 199 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Zdhhc13Q9CWU2 622 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 TsfmQ9CZR8 324 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Thsd1Q9JM61 851 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm266A6H634 200 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Znf551B2RUI1 696 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lce6aD3YV94 81 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr544E9PX47 334 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Igf2P09535 180 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Aqp8P56404 261 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 St8sia5P70126 412 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 MlanaQ2TA50 113 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Zp3rQ60736 579 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 ArhgdigQ62160 225 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Rrnad1Q8BZG5 475 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lrrn3Q8CBC6 707 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Dync2li1Q8K0T2 351 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 CcnqQ8QZR8 250 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Sla2Q8R4L0 259 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Ccm2lQ8VCC6 481 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Efcab7Q8VDY4 628 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr985Q8VGB4 311 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1417Q8VGJ6 315 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Neurl1Q923S6 574 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Commd4Q9CQ02 199 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 OxsmQ9D404 459 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Q9DAE7 121 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Yipf7Q9JIM5 254 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm12117V9GXK0 151 aa18.8■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 PoleQ9WVF7 2283 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1084A0A1L1STZ9 313 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Zfp81B8JJZ7 531 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm6465F7A7Y6 181 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm8906L7N2A2 181 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Hps1O08983 704 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Kcns1O35173 497 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Thbs2Q03350 1172 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 SypQ62277 314 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr186Q8VEX5 309 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr866Q8VFI7 312 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1048Q8VGS2 320 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Rps19Q9CZX8 145 aaKnown RBP18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Abhd16aQ9Z1Q2 558 aa18.79■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Trav10nA0A075B622 114 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Trav10A0A075B642 114 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1315-ps1A0A140LI66 314 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lrp3E9Q1T6 790 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Cyp2j8G3UZ38 503 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Trav13d-3J3QMG8 112 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr597L7N224 315 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Tmem178bM0QWJ9 172 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Prdx6O08709 224 aaKnown RBP18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Foxl2O88470 375 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gpr143P70259 405 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 HfeP70387 359 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Zglp1Q1WG82 266 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 HgsnatQ3UDW8 656 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Klk8Q61955 260 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Csnk1a1Q8BK63 337 aaKnown RBP18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Trib3Q8K4K2 354 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1316Q8VG12 314 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr648Q8VG19 316 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr1052Q8VGR8 312 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Marc2Q922Q1 338 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 NwcQ9CQI4 244 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lime1Q9EQR5 269 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Cdk20Q9JHU3 346 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Tinf2Q9QXG9 341 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Acox1Q9R0H0 661 aaKnown RBP18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Dock7Q8R1A4 2130 aaKnown RBP18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Dmxl2Q8BPN8 3032 aa18.78■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Abca7Q91V24 2159 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm13078A2AGW8 474 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Olfr172E9Q8F6 309 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 4933403O08RikF6UK53 379 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 P2rx6O54803 389 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Stc2O88452 296 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 DcnP28654 354 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Upk2P38575 184 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 InhbbQ04999 411 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Wdr34Q5U4F6 535 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Prm3Q62100 101 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Zfp180Q6NZI9 655 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lsm10Q8QZX5 122 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Pofut1Q91ZW2 393 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Letmd1Q924L1 360 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Hspb2Q99PR8 182 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Tm7sf3Q9CRG1 565 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Med18Q9CZ82 208 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Tmem138Q9D6G5 162 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Lpar3Q9EQ31 354 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 GmfgQ9ERL7 142 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Tbl2Q9R099 442 aaKnown RBP18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 MokQ9WVS4 420 aa18.77■□□□□ 0.6
Ccdc88a-202ENSMUST00000109477 Gm2022A0A1Y7VLT7 144 aa18.77■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Mtg2A2AFK4 405 aa18.77■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Trabd2bB1ATG9 517 aa18.77■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms