RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr12Q60894 333 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tbpl2Q6SJ95 350 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Aph1bQ8C7N7 257 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 A930004D18RikQ8C8W7 157 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 NpntQ91V88 561 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 PecrQ99MZ7 303 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cisd2Q9CQB5 135 aaKnown RBP11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Eif1bQ9CXU9 113 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmem126bQ9D1R1 230 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mmp1aQ9EPL5 464 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cdc20Q9JJ66 499 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1320A2AHM8 319 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr373E9Q4J3 314 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tfap2aP34056 437 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 G6pd2P97324 513 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr775Q7TRI4 312 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr372Q7TRY2 314 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zbtb42Q811H0 420 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc6a17Q8BJI1 727 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Yif1aQ91XB7 293 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fxyd4Q9D2W0 88 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Matn4O89029 624 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Stard6P59096 233 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rab33aP97950 237 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Atf7ip2Q3UL97 452 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Lkaaear1Q8BIG2 198 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fam124bQ8BLQ0 456 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Erlec1Q8VEH8 483 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 EdaraddQ8VHX2 208 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 VirmaA2AIV2 1811 aaKnown RBP11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 1700023F06RikA2AB62 382 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp988F6VKC7 633 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sub1P11031 127 aaKnown RBP11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Naa50Q6PGB6 169 aaKnown RBP11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r234Q8R298 329 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Scamp4Q9JKV5 230 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adam11Q9R1V4 773 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Phf1Q9Z1B8 559 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp345A2AQA1 561 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Kcns1O35173 497 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ranbp10Q6VN19 620 aaKnown RBP11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr598Q7TRR2 319 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 PhyhipQ8K0S0 330 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Glb1lQ8VC60 646 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr460Q8VF31 314 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr57Q8VGU7 319 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 P2ry4Q9JJS7 361 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Minpp1Q9Z2L6 481 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Il17dA0A0B4J1G4 205 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr59B1ARL3 323 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Yjefn3F6W8I0 251 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gdf3Q07104 366 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Acsm4Q80W40 580 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mob1bQ8BPB0 216 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr54Q8VFE6 313 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1294Q8VGE5 312 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rab5aQ9CQD1 215 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 Barx1Q9ER42 254 aa11.01□□□□□ -0.65
Trim56-201ENSMUST00000054384 BC051665E9Q623 330 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cdhr4H3BJZ2 783 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Degs1O09005 323 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nme1P15532 152 aaKnown RBP11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r195Q5SVD6 316 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 PrlhrQ6VMN6 370 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dcaf12l2Q8BGW4 469 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 PigwQ8C398 503 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr881Q8VF63 314 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ndufb7Q9CR61 137 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q9DAE7 121 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 ItgaxQ9QXH4 1169 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ppp1r3dA2AJW4 279 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 FiglaO55208 194 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 RradO88667 308 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sox9Q04887 507 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 SctQ08535 133 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cd84Q18PI6 329 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 LipkQ8BM14 398 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nudt9Q8BVU5 350 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Klrc1Q9Z202 244 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Iglc4A0A0G2JEK5 104 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1223A0A1L1SU13 311 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tnfrsf17O88472 185 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Creg1O88668 220 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc6a9P28571 692 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 SnrpgP62309 76 aaKnown RBP11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tas2r116Q7M713 305 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Coq3Q8BMS4 370 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r6Q8R2D4 303 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1411Q8VFC4 323 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmem70Q921N7 253 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gstk1Q9DCM2 226 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Il21rQ9JHX3 529 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Isg20Q9JL16 300 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fbxw28E9Q8A4 466 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 DraxinQ6PAL1 343 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 SuoxQ8R086 546 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr575Q8VH16 318 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 MtfmtQ9D799 386 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ubr2Q6WKZ8 1755 aa11□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr574F8VQ18 346 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms