RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Jagn1Q5XKN4 183 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Heatr6Q6P1G0 1184 aaKnown RBP11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Olfr1222Q7TR02 311 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 NrrosQ8BMT4 693 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Lhfpl3Q9CTN8 222 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gins1Q9CZ15 196 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Trp53tg5Q9D976 238 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Psmb3Q9R1P1 205 aa11.63□□□□□ -0.55
Clcn3-201ENSMUST00000004430 4930563M21RikA0A1L1SUT5 578 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Rdh19G5E8H9 318 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Stc2O88452 296 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Selenbp1P17563 472 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Col19a1Q0VF58 1136 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 GldnQ8BMF8 549 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 QdprQ8BVI4 241 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Rnf222Q8CEF8 211 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gpn1Q8VCE2 372 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Olfr98Q8VFD9 309 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 GhitmQ91VC9 346 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Med30Q9CQI9 178 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 PsenenQ9CQR7 101 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Emc6Q9CQW0 110 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Rnf186Q9D241 226 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Cd163l1A0A1B0GSB0 991 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ms4a7E9Q9V5 267 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Prrt1O35449 306 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 EbpP70245 230 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Acsf3Q3URE1 583 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 4930438A08RikQ5SPH3 536 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Kcnc3Q63959 769 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Glt8d1Q6NSU3 371 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 March1Q6NZQ8 289 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Fpr-rs7Q71MR7 338 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ddhd2Q80Y98 699 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Flrt3Q8BGT1 649 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Zfp9Q8BIS1 454 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Fam120cQ8C3F2 1091 aaKnown RBP11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r28Q8R2C9 302 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ccdc115Q8VE99 180 aaKnown RBP11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Fbxo36Q9CQ24 188 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Sapcd1Q9CY86 146 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Tas2r105Q9JKT4 300 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ubl3Q9Z2M6 117 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Adamts9E9PUN6 1931 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Igkv10-94A0A075B5L1 115 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Trbv21A0A0A6YX06 97 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r137D3YTY1 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r143E9PUW9 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r157E9Q069 297 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Olfr427E9Q7E7 315 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r139E9Q8L6 297 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gstp3F6RWR5 210 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Zfp988F6VKC7 633 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r112G3UY48 297 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r135K9J7G0 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r125L7N227 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r116L7N2A6 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Wnt9bO35468 359 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Nipsnap2O55126 281 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Wnt2bO70283 389 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gpr83P30731 423 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Il2rgP34902 369 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Rab2aP53994 212 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Lefty2P57785 368 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Rps10P63325 165 aaKnown RBP11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 HfeP70387 359 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ctf1Q60753 203 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Tas2r113Q7M711 309 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Lysmd4Q8CC84 293 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Mfsd6lQ8R3N2 586 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Papd4Q91YI6 484 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Sytl3Q99N48 607 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Sgo1Q9CXH7 517 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Alkbh7Q9D6Z0 221 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 RgccQ9DBX1 137 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Vmn1r100Q9EPS5 307 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Nkx2-4Q9EQM3 354 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Slco1b2Q9JJL3 689 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Clec6aQ9JKF4 209 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gm17087V9GXQ2 156 aa11.62□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Htra4A2RT60 483 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Gm15446D3Z5Y8 553 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Olfr1410E9PYK6 323 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 4930522L14RikE9QAG4 666 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Dbil5O09035 87 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 DffbO54788 344 aaKnown RBP11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 PomcP01193 235 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Hoxb9P20615 250 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 BglapP86546 95 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Bglap2P86547 95 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 FapP97321 761 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 JPT1P97825 154 aaKnown RBP11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 XylbQ3TNA1 551 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 SrmQ64674 302 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Olfr1257Q8VGP0 309 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Ubqln4Q99NB8 596 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 BambiQ9D0L6 260 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 TollipQ9QZ06 274 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 MeltfQ9R0R1 738 aa11.61□□□□□ -0.55
Clcn3-201ENSMUST00000004430 Padi1Q9Z185 662 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms