RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 OR1L3Q8NH93 324 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KLK11Q9UBX7 282 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 IMPA2O14732 288 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 DHHO43323 396 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PDGFAP04085 211 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 HOXC4P09017 264 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PRKACAP17612 351 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 CNR1P21554 472 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 F2RL1P55085 397 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 CLDN15P56746 228 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 EDDM3AQ14507 147 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 GPNMBQ14956 572 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SSX1Q16384 188 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ZNF425Q6IV72 752 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SLC22A25Q6T423 547 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 FAM234AQ9H0X4 552 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PCED1AQ9H1Q7 454 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PUS1Q9Y606 427 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 FGF9P31371 208 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 DMRTC1Q5HYR2 192 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ZADH2Q8N4Q0 377 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 OTOSQ8NHW6 89 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 MSI2Q96DH6 328 aaKnown RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ZNF2Q9BSG1 426 aaPredicted RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 TRBV5-3A0A0A0MS03 114 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 H7C1Q1 480 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 OPRM1P35372 400 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 ARL3P36405 182 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 CRYBB2P43320 205 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 KIR2DL3P43628 341 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 INSL4Q14641 139 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 LAIR1Q6GTX8 287 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 OR8B4Q96RC9 309 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 FOLR1P15328 257 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 SNCAP37840 140 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 TAF9Q16594 264 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 SLC38A9Q8NBW4 561 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 FAM60AQ9NP50 221 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 A8MXE2 369 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 NRASP01111 189 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 CT62P0C5K7 136 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 B4GALT1P15291 398 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 PI3P19957 117 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 DUSP2Q05923 314 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 CLN3Q13286 438 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 OR51A4Q8NGJ6 313 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 LY75O60449 1722 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 ATG2BQ96BY7 2078 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 IGHV3-64DA0A0J9YX35 117 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 C5orf49A4QMS7 147 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 WNT11O96014 354 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 KITLGP21583 273 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 CDAP32320 146 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 ZNF266Q14584 549 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 SLC10A1Q14973 349 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 GUSBP11Q6P575 273 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 C10orf111Q8N326 155 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 KCNE4Q8WWG9 221 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 PELI1Q96FA3 418 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 SERTAD4Q9NUC0 356 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
PCDHB16-201ENST00000609684 A0A087WZY1 265 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 FAM221AA4D161 298 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 K7EQS6 105 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 RTL8AQ9BWD3 113 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 CBR3O75828 277 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 GLSO94925 669 aaPredicted RBP12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 PCMT1P22061 227 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 CST9LP1Q5W188 147 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 CD300LDQ6UXZ3 194 aa12.86□□□□□ -0.35
PCDHB16-201ENST00000609684 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms