RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ZNF26P17031 533 aaPredicted RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 HMGA1P17096 107 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGFBP5P24593 272 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TEAD1P28347 426 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 FOXN2P32314 431 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ATP4BP51164 291 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 EMP2P54851 167 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 STX17P56962 302 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 DGCR6Q14129 220 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 PTPN20Q4JDL3 420 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 C5orf47Q569G3 176 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF658Q5TYW1 1059 aaPredicted RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF691Q5VV52 312 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TIGD3Q6B0B8 471 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 OR2W3Q7Z3T1 314 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 LRRC6Q86X45 466 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 HOGA1Q86XE5 327 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 CIARTQ8N365 385 aaPredicted RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 METTL4Q8N3J2 472 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 SVOPLQ8N434 492 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 METTL27Q8N6F8 245 aaPredicted RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 SAMD12Q8N8I0 201 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 CDRT4Q8N9R6 151 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 C2orf15Q8WU43 125 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 STMN2Q93045 179 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 NABP1Q96AH0 204 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 RPEQ96AT9 228 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 DNAJC19Q96DA6 116 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF354BQ96LW1 612 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 MS4A4EQ96PG1 132 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 CTRCQ99895 268 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 MED10Q9BTT4 135 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TIPINQ9BVW5 301 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 SYT4Q9H2B2 425 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 LIME1Q9H400 295 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 C1orf198Q9H425 327 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 RBKSQ9H477 322 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 LRRC19Q9H756 370 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 PATZ1Q9HBE1 687 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ACP6Q9NPH0 428 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF71Q9NQZ8 489 aaPredicted RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 MLXQ9UH92 298 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 RIMS3Q9UJD0 308 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 TMCO1Q9UM00 188 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 COPS3Q9UNS2 423 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 FBXO7Q9Y3I1 522 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 SAR1BQ9Y6B6 198 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 URGCP-MRPS24S4R325 110 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ITPR2Q14571 2701 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ANKRD17O75179 2603 aaKnown RBP3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 ICE1Q9Y2F5 2266 aa3.17□□□□□ -1.9
IGHV3-29-201ENST00000604817 USP9YO00507 2555 aaPredicted RBP3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 UTP20O75691 2785 aaKnown RBP3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 SCN1AP35498 2009 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRAV19A0A0A6YYK7 116 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 A0A1B0GTH9 108 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 E7ESA3 106 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 F8VP50 259 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 K7EQD1 137 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 SULT2B1O00204 365 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 SLC9A3R1O14745 358 aaPredicted RBP3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TNFSF11O14788 317 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 PPP1R2P9O14990 202 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 SLC16A4O15374 487 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF749O43361 778 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 CLIC3O95833 236 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGHV2-5P01817 119 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGHG1P01857 330 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 FGGP02679 453 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 FGF1P05230 155 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TACSTD2P09758 323 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 PAX1P15863 534 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 GABRG2P18507 467 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ATF6P18850 670 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 CNR1P21554 472 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 AQP2P41181 271 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ELK3P41970 407 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TFPI2P48307 235 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 CSNK1A1P48729 337 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 MFAP2P55001 183 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 PAX9P55771 341 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 RIPPLY3P57055 190 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ERVK11-1P61568 191 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ERVK-16P61578 105 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 IL18R1Q13478 541 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 FHL1Q13642 323 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRAM2Q15035 370 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZBTB6Q15916 424 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 PGGHGQ32M88 737 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRMT5Q32P41 509 aaKnown RBP3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 PAN3Q58A45 887 aaKnown RBP3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 MS4A13Q5J8X5 152 aa3.16□□□□□ -1.9
IGHV3-29-201ENST00000604817 TPRG1LQ5T0D9 272 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms