RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 EDA2RQ9HAV5 297 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 LPAR2Q9HBW0 351 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 PRSS16Q9NQE7 514 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 CBLN4Q9NTU7 201 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 AIPL1Q9NZN9 384 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 NFKBIL1Q9UBC1 381 aaPredicted RBP0.29□□□□□ -2.36
CEP290-208ENST00000604024 BCAP29Q9UHQ4 241 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 DNPEPQ9ULA0 475 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 IKBKGQ9Y6K9 419 aa0.29□□□□□ -2.36
CEP290-208ENST00000604024 MCM3APO60318 1980 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 YLPM1P49750 1951 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 DNAH3Q8TD57 4116 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SCN2AQ99250 2005 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 PRR14LQ5THK1 2151 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA8QA0A0J9YX86 632 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA8OA6NCC3 632 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 DEFB108AA8MXU0 73 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA8NF8WBI6 632 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 GOLGA8RI6L899 631 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 XPO1O14980 1071 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 ZBTB5O15062 677 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 RS1O15537 224 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 RBFOX2O43251 390 aaKnown RBP eCLIP0.28□□□□□ -2.36
CEP290-208ENST00000604024 LGI1O95970 557 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 MBD3O95983 291 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IGLV2-23P01705 113 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IL4P05112 153 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IGKV5-2P06315 115 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IVLP07476 585 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 UQCRHP07919 91 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 MSMBP08118 114 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 HMOX1P09601 288 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SLC35E2BP0CK96 405 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 HMGA1P17096 107 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 NELFEP18615 380 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 CNR1P21554 472 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 TBXA2RP21731 343 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IL10P22301 178 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 WARSP23381 471 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 CXCR2P25025 360 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CA5AP35218 305 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CD79BP40259 229 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CCR8P51685 355 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 RBP5P82980 135 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 OGDHQ02218 1023 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 KDSRQ06136 332 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ELP6Q0PNE2 266 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 RCAN2Q14206 197 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 MORF4L2Q15014 288 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ZMYND11Q15326 602 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ALKBH6Q3KRA9 238 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 BOLA3Q53S33 107 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ZNF684Q5T5D7 378 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 LELP1Q5T871 98 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SPECC1LQ69YQ0 1117 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 NIPAL1Q6NVV3 410 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CEMP1Q6PRD7 247 aaPredicted RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 ACOT7LQ6ZUV0 252 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CENPUQ71F23 418 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 NDUFAF7Q7L592 441 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 TAF8Q7Z7C8 310 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SGPP2Q8IWX5 399 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 FTMTQ8N4E7 242 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 METTL13Q8N6R0 699 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 APCDD1LQ8NCL9 501 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SYNPRQ8TBG9 265 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CNDP1Q96KN2 507 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 C9orf72Q96LT7 481 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 NAP1L3Q99457 506 aaPredicted RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 RIT2Q99578 217 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ACBD6Q9BR61 282 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 THUMPD2Q9BTF0 503 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 TMEM70Q9BUB7 260 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SPZ1Q9BXG8 430 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 CALN1Q9BXU9 219 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 RAB1BQ9H0U4 201 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 HOMER3Q9NSC5 361 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 C14orf105Q9NVL8 296 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 GPATCH2LQ9NWQ4 482 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 SMPD3Q9NY59 655 aaPredicted RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 AATFQ9NY61 560 aaKnown RBP eCLIP0.28□□□□□ -2.36
CEP290-208ENST00000604024 UBAP1Q9NZ09 502 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 IL37Q9NZH6 218 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 PDP1Q9P0J1 537 aaPredicted RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 SPATA7Q9P0W8 599 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 TRIM10Q9UDY6 481 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 FETUBQ9UGM5 382 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 KIF25Q9UIL4 384 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 NUP50Q9UKX7 468 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 YARS2Q9Y2Z4 477 aaKnown RBP0.28□□□□□ -2.36
CEP290-208ENST00000604024 KIF3AQ9Y496 699 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 AP4B1Q9Y6B7 739 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 HTTP42858 3142 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 ZFHX3Q15911 3703 aa0.28□□□□□ -2.36
CEP290-208ENST00000604024 DCHS2Q6V1P9 2916 aa0.28□□□□□ -2.37
CEP290-208ENST00000604024 ARFGEF3Q5TH69 2177 aa0.28□□□□□ -2.37
CEP290-208ENST00000604024 FRYLO94915 3013 aa0.28□□□□□ -2.37
CEP290-208ENST00000604024 DMXL1Q9Y485 3027 aa0.28□□□□□ -2.37
CEP290-208ENST00000604024 FAM92AA1XBS5 289 aa0.28□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms