RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SCRN3Q0VDG4 424 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ODF4Q2M2E3 257 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 SPANXN2Q5MJ10 180 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 DDI2Q5TDH0 399 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 RDH10Q8IZV5 341 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 THRSPQ92748 146 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 DERL3Q96Q80 235 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 PLEK2Q9NYT0 353 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ZNF224Q9NZL3 707 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 OR52A1Q9UKL2 312 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ZNF835Q9Y2P0 537 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 ACOD1A6NK06 481 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 PRRG2O14669 202 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 SGCEO43556 437 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 MMP7P09237 267 aaPredicted RBP13.28□□□□□ -0.28
VRK3-207ENST00000594092 RAB3BP20337 219 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 CTSSP25774 331 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 TIMP3P35625 211 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 PSMA6P60900 246 aaKnown RBP13.28□□□□□ -0.28
VRK3-207ENST00000594092 ZNF45Q02386 682 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 RAB35Q15286 201 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 MZT2AQ6P582 158 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 BTLAQ7Z6A9 289 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 DOLPP1Q86YN1 238 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 OR10AC1Q8NH08 325 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 WACQ9BTA9 647 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 OR2H1Q9GZK4 316 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 TP63Q9H3D4 680 aaPredicted RBP13.28□□□□□ -0.28
VRK3-207ENST00000594092 BRD7Q9NPI1 651 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 PLSCR4Q9NRQ2 329 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 TIMM10BQ9Y5J6 103 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
VRK3-207ENST00000594092 TTLL8A6PVC2 850 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 SYNGR3O43761 229 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 DOK2O60496 412 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 SLC19A2O60779 497 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 CRHP06850 196 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 TMIGD3P0DMS9 266 aaPredicted RBP13.27□□□□□ -0.28
VRK3-207ENST00000594092 ETV6P41212 452 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 MAGEB1P43366 347 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 PSG4Q00888 419 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 GALK2Q01415 458 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 RSPO1Q2MKA7 263 aaPredicted RBP13.27□□□□□ -0.28
VRK3-207ENST00000594092 ZNF774Q6NX45 483 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 Q6ZT83 130 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 NAXEQ8NCW5 288 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 OR1K1Q8NGR3 316 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 AKR7LQ8NHP1 331 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 ACOT12Q8WYK0 555 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 STARD4Q96DR4 205 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 WDFY2Q96P53 400 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 HDHD2Q9H0R4 259 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 WNT5BQ9H1J7 359 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 ATRXP46100 2492 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 ITPR1Q14643 2758 aa13.27□□□□□ -0.28
VRK3-207ENST00000594092 RP1L1Q8IWN7 2480 aaPredicted RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 PDCD5O14737 125 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 CNOT4O95628 575 aaKnown RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 IL2RAP01589 272 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SFTPCP11686 197 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SRMP19623 302 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 CD40LGP29965 261 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 TNFSF8P32971 234 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SOX2P48431 317 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 CX3CR1P49238 355 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 PPP5CP53041 499 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 ZNF121P58317 390 aaPredicted RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 EIF2S3LQ2VIR3 472 aaKnown RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 IDNKQ5T6J7 187 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SFXN4Q6P4A7 337 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 ANKRD16Q6P6B7 361 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 NR2C2APQ86WQ0 139 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 LAX1Q8IWV1 398 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 ZNF283Q8N7M2 679 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 OR51A4Q8NGJ6 313 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 OR1F12Q8NHA8 337 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 TSEN15Q8WW01 171 aaKnown RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 SLC7A6Q92536 515 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 ZFP3Q96NJ6 502 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SLC30A2Q9BRI3 323 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 PBOV1Q9GZY1 135 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 SLITRK2Q9H156 845 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 ABCB9Q9NP78 766 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 ACACBO00763 2458 aa13.27□□□□□ -0.29
VRK3-207ENST00000594092 INTS1Q8N201 2190 aaKnown RBP13.27□□□□□ -0.29
VRK3-207ENST00000594092 OR6C6A6NF89 314 aa13.26□□□□□ -0.29
VRK3-207ENST00000594092 F5H5K5 113 aa13.26□□□□□ -0.29
VRK3-207ENST00000594092 PIN1P1O15428 100 aa13.26□□□□□ -0.29
VRK3-207ENST00000594092 CGAP01215 116 aa13.26□□□□□ -0.29
VRK3-207ENST00000594092 RAF1P04049 648 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms