RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ELOVL3Q9HB03 270 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 TBC1D23Q9NUY8 699 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ARMC1Q9NVT9 282 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 NKIRAS2Q9NYR9 191 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 GPR160Q9UJ42 338 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 ATRQ13535 2644 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 MXRA5Q9NR99 2828 aa9.55□□□□□ -0.88
SMAD4-211ENST00000590499 RP2O75695 350 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 DBHP09172 617 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 IGHV4-31P0DP07 118 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 PSKH1P11801 424 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 PYCR1P32322 319 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 MAGEB1P43366 347 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CENPAP49450 140 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 ARHGDIAP52565 204 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CBX1P83916 185 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CRMP1Q14194 572 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 GGTLC2Q14390 218 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 MOGQ16653 247 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-211ENST00000590499 C6orf52Q5T4I8 152 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CORO6Q6QEF8 472 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CFAP77Q6ZQR2 320 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 HS3ST5Q8IZT8 346 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 GJC3Q8NFK1 279 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 OR2T33Q8NG76 320 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 YIPF5Q969M3 257 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 DCLRE1CQ96SD1 692 aaKnown RBP9.54□□□□□ -0.88
SMAD4-211ENST00000590499 COQ7Q99807 217 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 HDHD2Q9H0R4 259 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 NTN4Q9HB63 628 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 PNRC2Q9NPJ4 139 aaKnown RBP9.54□□□□□ -0.88
SMAD4-211ENST00000590499 PDP1Q9P0J1 537 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-211ENST00000590499 DNAJB9Q9UBS3 223 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 KLHL21Q9UJP4 597 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 POLR1DQ9Y2S0 133 aa9.54□□□□□ -0.88
SMAD4-211ENST00000590499 ZSCAN5BA6NJL1 495 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ATP5HO75947 161 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ADH4P08319 380 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ZNF23P17027 643 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ACHEP22303 614 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 TUBG1P23258 451 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 COL8A2P25067 703 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 GCH1P30793 250 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ERFP50548 548 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 SLC25A1P53007 311 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 PSG7Q13046 419 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 PCK2Q16822 640 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 PCGF3Q3KNV8 242 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 SLC36A3Q495N2 470 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 TMEM154Q6P9G4 183 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ARL9Q6T311 187 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 COLCA1Q6ZS62 124 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-211ENST00000590499 LINC00346Q8IVM7 164 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 OR2T4Q8NH00 348 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 SNX33Q8WV41 574 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 RDH5Q92781 318 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 YY1AP1Q9H869 796 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 CHODLQ9H9P2 273 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 TUBG2Q9NRH3 451 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 CGGBP1Q9UFW8 167 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-211ENST00000590499 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 STARD10Q9Y365 291 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 GRIP1Q9Y3R0 1128 aa9.53□□□□□ -0.88
SMAD4-211ENST00000590499 GNGT2O14610 69 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 E2F6O75461 281 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 CRLF1O75462 422 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 IGHV1-46P01743 117 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 MT-ND5P03915 603 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 ZNF16P17020 682 aaPredicted RBP9.52□□□□□ -0.89
SMAD4-211ENST00000590499 SPI1P17947 270 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 KITLGP21583 273 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 IL2RGP31785 369 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 GRK5P34947 590 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 RGS6P49758 472 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 GZMKP49863 264 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 RASSF2P50749 326 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 ZNF81P51508 661 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 CCL8P80075 99 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 PPP2R2BQ00005 443 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 CDK5R2Q13319 367 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 TRIP10Q15642 601 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 FAM209AQ5JX71 171 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 LINC01590Q5TEZ4 76 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 SHQ1Q6PI26 577 aaKnown RBP9.52□□□□□ -0.89
SMAD4-211ENST00000590499 IQCF1Q8N6M8 205 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 PROKR2Q8NFJ6 384 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 OR51L1Q8NGJ5 315 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 OR10S1Q8NGN2 331 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 OR9Q1Q8NGQ5 310 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 TEX47Q8TBZ9 253 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 MAP6Q96JE9 813 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 COG8Q96MW5 612 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 SOX7Q9BT81 388 aa9.52□□□□□ -0.89
SMAD4-211ENST00000590499 HCAR1Q9BXC0 346 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms