RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 TMEM208Q9BTX3 173 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 TRAF4Q9BUZ4 470 aaPredicted RBP2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 YTHDF1Q9BYJ9 559 aaKnown RBP2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 NHEJ1Q9H9Q4 299 aaPredicted RBP2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 UGT1A7Q9HAW7 530 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 UGT1A8Q9HAW9 530 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 C6orf50Q9HD87 102 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 MCUBQ9NWR8 336 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 TREM2Q9NZC2 230 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 UBQLN1Q9UMX0 589 aaKnown RBP2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 HEY1Q9Y5J3 304 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 CPQQ9Y646 472 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 CACNA1FO60840 1977 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 ARID2Q68CP9 1835 aa2.79□□□□□ -1.96
NEDD4L-217ENST00000587246 A0A1B0GU03 582 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 A0A1B0GV90 55 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 A0A1B0GW55 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TCRBV9S1A1TA0A576 114 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ANKRD20A5PA0PJZ0 165 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TSPAN11A1L157 253 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 VPS37CA5D8V6 355 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SMIM9A6NGZ8 99 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TSTD3H0UI37 97 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 H7C0C1 242 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SSNA1O43805 119 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ALOX12BO75342 701 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ENTPD6O75354 484 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 KHDRBS3O75525 346 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TRAPPC6AO75865 159 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 OR7A10O76100 309 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 CLIC3O95833 236 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 IGSF6O95976 241 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 CYB5R3P00387 301 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 CATP04040 527 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L2P0CJ85 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L3P0CJ86 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L4P0CJ87 422 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L5P0CJ88 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L6P0CJ89 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L7P0CJ90 424 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 LIMS3P0CW19 117 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 LIMS4P0CW20 117 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 HIST1H1EP10412 219 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 LIPCP11150 499 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SCGB1A1P11684 91 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 PVALBP20472 110 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GDF1P27539 372 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GRPRP30550 384 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 FGF9P31371 208 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 PMELP40967 661 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 OPRD1P41143 372 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GLP1RP43220 463 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GABRA4P48169 554 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SRP9P49458 86 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 PPOXP50336 477 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 VSX2P58304 361 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 PAFAH1B2P68402 229 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 APOFQ13790 326 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TEAD2Q15562 447 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUSP7Q16829 419 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 KLHL12Q53G59 568 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 PLPP4Q5VZY2 271 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TMEM42Q69YG0 159 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 FAM53AQ6NSI3 398 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 FBXL22Q6P050 247 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ZFP1Q6P2D0 407 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 FAM199XQ6PEV8 388 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 Q6ZT83 130 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GDPD3Q7L5L3 318 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 HSD11B1LQ7Z5J1 315 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 CMC1Q7Z7K0 106 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 KIRREL3Q8IZU9 778 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 OR2L13Q8N349 312 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 STX19Q8N4C7 294 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 KIR3DL3Q8N743 410 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 CLDN22Q8N7P3 220 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ATP6V0D2Q8N8Y2 350 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 ZSCAN4Q8NAM6 433 aaPredicted RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 HSD17B11Q8NBQ5 300 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TMEM161BQ8NDZ6 487 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SYNPRQ8TBG9 265 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SLC7A13Q8TCU3 470 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 AENQ8WTP8 325 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GATAD1Q8WUU5 269 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 HPSE2Q8WWQ2 592 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 MARC2Q969Z3 335 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 RAB3CQ96E17 227 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 SFRP2Q96HF1 295 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TMEM56Q96MV1 263 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 NEDD4LQ96PU5 975 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 RHNO1Q9BSD3 238 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 URM1Q9BTM9 101 aaKnown RBP2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 TMED9Q9BVK6 235 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 RAB34Q9BZG1 259 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 DSN1Q9H410 356 aa2.78□□□□□ -1.96
NEDD4L-217ENST00000587246 GLIPR2Q9H4G4 154 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms