RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 A0A1B0GVC2 190 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 RPL36A-HNRNPH2H7BZ11 118 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 AIPO00170 330 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 TFECO14948 347 aaPredicted RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 PIN1P1O15428 100 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 TPPPO94811 219 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 PNPP00491 289 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 APOA1P02647 267 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 YES1P07947 543 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CELA3AP09093 270 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 FCGR2AP12318 317 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 COL8A1P27658 744 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CDAP32320 146 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 TALDO1P37837 337 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 RFC3P40938 356 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CAV3P56539 151 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 SRYQ05066 204 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 RIN1Q13671 783 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 SF3B4Q15427 424 aaKnown RBP eCLIP9.15□□□□□ -0.942e-6■■■□□ 15.9
LIG3-203ENST00000585370 PHYHD1Q5SRE7 291 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 FAM27D1Q5T7N8 215 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 BCL2L15Q5TBC7 163 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CORO6Q6QEF8 472 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 FAM131AQ6UXB0 335 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 BAIAP2L2Q6UXY1 529 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 STAC2Q6ZMT1 411 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 LAX1Q8IWV1 398 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CHPT1Q8WUD6 406 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 TSEN15Q8WW01 171 aaKnown RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 HSD17B8Q92506 261 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 TMEM106AQ96A25 262 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 NABP1Q96AH0 204 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 WDYHV1Q96HA8 205 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 ZNF845Q96IR2 970 aaPredicted RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 KCNJ15Q99712 375 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 SOSTQ9BQB4 213 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 DEFB127Q9H1M4 99 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 SLCO5A1Q9H2Y9 848 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 SP140LQ9H930 580 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 EMC7Q9NPA0 242 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 G6PC2Q9NQR9 355 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 CYSLTR2Q9NS75 346 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 DDX28Q9NUL7 540 aaKnown RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 NUFIP1Q9UHK0 495 aaKnown RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 ERRFI1Q9UJM3 462 aaPredicted RBP9.15□□□□□ -0.94
LIG3-203ENST00000585370 SPATA2Q9UM82 520 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 EMC9Q9Y3B6 208 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 A0A1W2PPK0 400 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FAM25AB3EWG3 89 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FAM25CB3EWG5 89 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FAM25GB3EWG6 89 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 DVL2O14641 736 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 KRT33AO76009 404 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 NCR1O76036 304 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FARS2O95363 451 aaKnown RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 CLDN1O95832 211 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 CALCBP10092 127 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ZNF24P17028 368 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FSTP19883 344 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 CFPP27918 469 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 THBS2P35442 1172 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 CAPZA1P52907 286 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 PSMA6P60900 246 aaKnown RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 SCRN3Q0VDG4 424 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ENDOGQ14249 297 aaKnown RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 ELFN2Q5R3F8 820 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 Q6ZNX1 250 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 SPATC1Q76KD6 591 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ABHD12BQ7Z5M8 362 aaPredicted RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 OR10S1Q8NGN2 331 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 SETD6Q8TBK2 473 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ASB5Q8WWX0 329 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FOXRED1Q96CU9 486 aaPredicted RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 PBOV1Q9GZY1 135 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 CRLF2Q9HC73 371 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 GPR35Q9HC97 309 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 TMEM38BQ9NVV0 291 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 FAM206AQ9NX38 181 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ASH2LQ9UBL3 628 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 DAPK2Q9UIK4 370 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 GTF2A1LQ9UNN4 478 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 SLC22A13Q9Y226 551 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 AK6Q9Y3D8 172 aaKnown RBP9.14□□□□□ -0.95
LIG3-203ENST00000585370 FREM3P0C091 2139 aa9.14□□□□□ -0.95
LIG3-203ENST00000585370 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 A0A1B0GTH9 108 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 A0A1B0GVI7 797 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SMIM30A4D0T7 59 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ANXA2P2A6NMY6 339 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 IFITM5A6NNB3 132 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 AQP7O14520 342 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 TBX1O43435 398 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 HPGDSO60760 199 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ANXA2P07355 339 aaKnown RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 CD37P11049 281 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 NR4A2P43354 598 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SOX2P48431 317 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms