RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 SLC29A1Q99808 456 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 ABHD6Q9BV23 337 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 DDX28Q9NUL7 540 aaKnown RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 MYEF2Q9P2K5 600 aaKnown RBP13.04□□□□□ -0.32
LITAF-217ENST00000575426 MED13LQ71F56 2210 aa13.04□□□□□ -0.32
LITAF-217ENST00000575426 CSMD1Q96PZ7 3565 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 TIMM8AO60220 97 aaPredicted RBP13.03□□□□□ -0.32
LITAF-217ENST00000575426 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 LIPAP38571 399 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 DSCR9P59020 149 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 EFNB1P98172 346 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 MALLQ13021 153 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 MAD2L1BPQ15013 274 aaPredicted RBP13.03□□□□□ -0.32
LITAF-217ENST00000575426 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
LITAF-217ENST00000575426 AADACL4Q5VUY2 407 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 CLEC2AQ6UVW9 174 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 DRAM2Q6UX65 266 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 ZCCHC24Q8N2G6 241 aaKnown RBP13.03□□□□□ -0.32
LITAF-217ENST00000575426 ZNF283Q8N7M2 679 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 OR10S1Q8NGN2 331 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 RHNO1Q9BSD3 238 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 C1QTNF5Q9BXJ0 243 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 TPK1Q9H3S4 243 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 DCLRE1BQ9H816 532 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 SP140LQ9H930 580 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 C8orf4Q9NR00 106 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 CYSLTR2Q9NS75 346 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 PTTG3PQ9NZH4 202 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 LAMP5Q9UJQ1 280 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 TMEM14AQ9Y6G1 99 aa13.03□□□□□ -0.32
LITAF-217ENST00000575426 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 CSF3P09919 207 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 NAT2P11245 290 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 PSKH1P11801 424 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 CD99P14209 185 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 MPV17P39210 176 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 PRKXP51817 358 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 KRTAP27-1Q3LI81 207 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 KCTD18Q6PI47 426 aaPredicted RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 GALNT4Q8N4A0 578 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 ZNF555Q8NEP9 628 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 RFKQ969G6 155 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 CMBLQ96DG6 245 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 CNN2Q99439 309 aaKnown RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 MYOZ1Q9NP98 299 aaPredicted RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 CGGBP1Q9UFW8 167 aaPredicted RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.33
LITAF-217ENST00000575426 N6AMT1Q9Y5N5 214 aa13.02□□□□□ -0.33
LITAF-217ENST00000575426 H0YHG0 523 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
LITAF-217ENST00000575426 RAC2P15153 192 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 PDLIM4P50479 330 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 ZNF81P51508 661 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 PSG7Q13046 419 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 GGTLC2Q14390 218 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 CARTPTQ16568 116 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 ZMAT1Q5H9K5 638 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 LPCAT4Q643R3 524 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 KRT77Q7Z794 578 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 NAA40Q86UY6 237 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 RNF133Q8WVZ7 376 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 FAM168AQ92567 244 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 MBOAT4Q96T53 435 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 POFUT1Q9H488 388 aa13.01□□□□□ -0.33
LITAF-217ENST00000575426 SMPD3Q9NY59 655 aaPredicted RBP13.01□□□□□ -0.33
LITAF-217ENST00000575426 LOC100130705A0A1B0GUX0 176 aa13□□□□□ -0.33
LITAF-217ENST00000575426 SNTNA6NMZ2 147 aa13□□□□□ -0.33
LITAF-217ENST00000575426 C17orf100A8MU93 164 aa13□□□□□ -0.33
LITAF-217ENST00000575426 PHYHO14832 338 aa13□□□□□ -0.33
LITAF-217ENST00000575426 LY6HO94772 140 aa13□□□□□ -0.33
LITAF-217ENST00000575426 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
LITAF-217ENST00000575426 DAOP14920 347 aa13□□□□□ -0.33
LITAF-217ENST00000575426 SELEP16581 610 aa13□□□□□ -0.33
LITAF-217ENST00000575426 OTX1P32242 354 aaPredicted RBP13□□□□□ -0.33
LITAF-217ENST00000575426 CX3CR1P49238 355 aa13□□□□□ -0.33
LITAF-217ENST00000575426 HCCSP53701 268 aa13□□□□□ -0.33
LITAF-217ENST00000575426 POU4F2Q12837 409 aa13□□□□□ -0.33
LITAF-217ENST00000575426 TMED1Q13445 227 aa13□□□□□ -0.33
LITAF-217ENST00000575426 TNK1Q13470 666 aa13□□□□□ -0.33
LITAF-217ENST00000575426 PCGF3Q3KNV8 242 aa13□□□□□ -0.33
LITAF-217ENST00000575426 MEDAGQ5VYS4 303 aa13□□□□□ -0.33
LITAF-217ENST00000575426 FBXW12Q6X9E4 464 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms