RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PTTG3PQ9NZH4 202 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 MAT2BQ9NZL9 334 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ENPP5Q9UJA9 477 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 PROCRQ9UNN8 238 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 AP3M1Q9Y2T2 418 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 ASB4Q9Y574 426 aa4.52□□□□□ -1.69
SF3B3-214ENST00000572365 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 A0A0B4J203 849 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SLC22A20A6NK97 555 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SDR42E2A6NKP2 422 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF487B1APH4 448 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 E7EQL1 145 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 LOC110117498-PIK3R3F6TDL0 507 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 H3BMM5 538 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 BMPR1BO00238 502 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 P2RY10O00398 339 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ATP6V0E1O15342 81 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 BCAS2O75934 225 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 AQP8O94778 261 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 MFN2O95140 757 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SNAPINO95295 136 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 APOC1P02654 83 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CATP04040 527 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SNRPAP09012 282 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SMIM10L1P0DMW3 83 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CPN1P15169 458 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SLC25A16P16260 332 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 RAB3AP20336 220 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CA6P23280 308 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CASP3P42574 277 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 HAAOP46952 286 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CDX1P47902 265 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SLC6A8P48029 635 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CLDN18P56856 261 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 RAB14P61106 215 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 RPL36AP83881 106 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 IFITM2Q01629 132 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 RGS1Q08116 209 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 TAF13Q15543 124 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 NNATQ16517 81 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 KLHL12Q53G59 568 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 NCMAPQ5T1S8 102 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 AGAP6Q5VW22 663 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF773Q6PK81 442 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 AFTPHQ6ULP2 937 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 FIP1L1Q6UN15 594 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ZNF600Q6ZNG1 722 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CHMP1BQ7LBR1 199 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PRSS48Q7RTY5 328 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 RTN4RL2Q86UN3 420 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 NUDCD3Q8IVD9 361 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PGAM4Q8N0Y7 254 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ANKFN1Q8N957 763 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 MORN4Q8NDC4 146 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 TTLQ8NG68 377 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 OR5L2Q8NGL0 311 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 OR1J4Q8NGS1 313 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 OR13F1Q8NGS4 319 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 TEX47Q8TBZ9 253 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 FANK1Q8TC84 345 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 UCN3Q969E3 161 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 MRPL24Q96A35 216 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SMIM10Q96HG1 83 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 DCUN1D5Q9BTE7 237 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 URM1Q9BTM9 101 aaKnown RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 C1QTNF6Q9BXI9 259 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PINK1Q9BXM7 581 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SIAEQ9HAT2 523 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SLCO1B3Q9NPD5 702 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 ESM1Q9NQ30 184 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CHRAC1Q9NRG0 131 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PAK1IP1Q9NWT1 392 aaPredicted RBP4.51□□□□□ -1.69
SF3B3-214ENST00000572365 FLRT3Q9NZU0 649 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 CNIH4Q9P003 139 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PHF11Q9UIL8 331 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 STUB1Q9UNE7 303 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 PPIAL4AQ9Y536 164 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 SNX5Q9Y5X3 404 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 TENM3Q9P273 2699 aa4.51□□□□□ -1.69
SF3B3-214ENST00000572365 BIRC6Q9NR09 4857 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NPIPA5A0A0B4J1W7 369 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 A0A1B0GW55 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 A0A1W2PR80 420 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SHISA9B4DS77 424 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NPIPA7E9PJI5 369 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RTCAO00442 366 aaKnown RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 TOR1AO14656 332 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ERI3O43414 337 aaKnown RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ZBTB14O43829 449 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 GMFGO60234 142 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 FGF17O60258 216 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 SELENOFO60613 162 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 PRAF2O60831 178 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 NME6O75414 186 aaPredicted RBP4.5□□□□□ -1.69
SF3B3-214ENST00000572365 UPK1BO75841 260 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 ACTL6AO96019 429 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 RLN1P04808 185 aa4.5□□□□□ -1.69
SF3B3-214ENST00000572365 DUX4L2P0CJ85 424 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms