RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FBXL19-AS1Q494R0 122 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 BCL2L15Q5TBC7 163 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 ALKBH2Q6NS38 261 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 OR2G2Q8NGZ5 317 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 RNF166Q96A37 237 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 MUCL1Q96DR8 90 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 USB1Q9BQ65 265 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 OR10A4Q9H209 315 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 MOB1AQ9H8S9 216 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 KCNJ16Q9NPI9 418 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 FAM206AQ9NX38 181 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
HERPUD1-219ENST00000570273 FASNP49327 2511 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 TRBV2A0A0J9YWF9 115 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 OGG1O15527 345 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 SRSF10O75494 262 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 PNPP00491 289 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 CELA3BP08861 270 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC2A1P11166 492 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 STOMP27105 288 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 OTX1P32242 354 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 TTKP33981 857 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 TGFBR2P37173 567 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 RGS6P49758 472 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 NANOS3P60323 173 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC3A1Q07837 685 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 CDSNQ15517 529 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 TAB1Q15750 504 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 DMKNQ6E0U4 476 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 FDX2Q6P4F2 183 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 CATSPERDQ86XM0 798 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF584Q8IVC4 421 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 PHC2Q8IXK0 858 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 SLC30A7Q8NEW0 376 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 SMIM19Q96E16 107 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 C1QTNF6Q9BXI9 259 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 MOV10Q9HCE1 1003 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 OR52A1Q9UKL2 312 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 NCOA6Q14686 2063 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 CACNA1CQ13936 2221 aa13.4□□□□□ -0.26
HERPUD1-219ENST00000570273 LOC100509620A0A075B734 347 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 SERPINA5P05154 406 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ACSM4P0C7M7 580 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CD36P16671 472 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ZNF14P17017 642 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CCNOP22674 350 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 KIR3DL2P43630 455 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 MMP16P51512 607 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 RPS25P62851 125 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 XKRXQ6PP77 449 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 DRAM2Q6UX65 266 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 FAM57BQ71RH2 274 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PRSS35Q8N3Z0 413 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ZNF808Q8N4W9 903 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ITLN2Q8WWU7 325 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 YIPF6Q96EC8 236 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ZNF75AQ96N20 296 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PBOV1Q9GZY1 135 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 NDUFB11Q9NX14 153 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 SLC22A13Q9Y226 551 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 FLNCQ14315 2725 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PYCARD-AS1I3L0S3 204 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CLDN14O95500 239 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 IGKV3-15P01624 115 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CCL2P13500 99 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PPP3CBP16298 524 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 AGAP20933 346 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ZNF83P51522 516 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CCR9P51686 369 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 HGFACQ04756 655 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 GPR50Q13585 617 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 TBC1D28Q2M2D7 210 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ODF4Q2M2E3 257 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 RSPO1Q2MKA7 263 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 MYPOPQ86VE0 399 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 ZNF676Q8N7Q3 588 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 IL17RDQ8NFM7 739 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 OR5AK2Q8NH90 309 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 RPS4Y2Q8TD47 263 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PCNX1Q96RV3 2341 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 TMED9Q9BVK6 235 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 COMMD4Q9H0A8 199 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CDH20Q9HBT6 801 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 G6PC2Q9NQR9 355 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 FRRS1LQ9P0K9 344 aa13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-219ENST00000570273 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms