RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SORDQ00796 357 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 INSM1Q01101 510 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZP2Q05996 745 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 AIMP2Q13155 320 aaKnown RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 DHRS2Q13268 280 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SNTB1Q13884 538 aaKnown RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SHHQ15465 462 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 HMGN3Q15651 99 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 VAX1Q5SQQ9 334 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 RHBDD2Q6NTF9 364 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 MTFR2Q6P444 385 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 IL34Q6ZMJ4 242 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 TRAPPC6BQ86SZ2 158 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 NAA40Q86UY6 237 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF101Q8IZC7 436 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF441Q8N8Z8 693 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SMRP1Q8NCR6 262 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 OR5M1Q8NGP8 315 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 OR10K1Q8NGX5 313 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 OR10R2Q8NGX6 335 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 DUSP19Q8WTR2 217 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZNRF4Q8WWF5 429 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 PP6455Q8WZ26 134 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SLC25A28Q96A46 364 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SLAMF6Q96DU3 332 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 CCDC120Q96HB5 630 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 LMF1Q96S06 567 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 NAA11Q9BSU3 229 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 PTDSS2Q9BVG9 487 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF471Q9BX82 626 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SHARPINQ9H0F6 387 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 TCEAL2Q9H3H9 227 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 CA10Q9NS85 328 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 SLC22A11Q9NSA0 550 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 CENPMQ9NSP4 180 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 ANKRD10Q9NXR5 420 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 RASL12Q9NYN1 266 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 KLRF1Q9NZS2 232 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 TNFSF18Q9UNG2 199 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 FARSAQ9Y285 508 aaKnown RBP6.83□□□□□ -1.32
ATXN3-250ENST00000568290 KLHDC2Q9Y2U9 406 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 POMT1Q9Y6A1 747 aa6.83□□□□□ -1.32
ATXN3-250ENST00000568290 IGLV3-12A0A075B6K2 115 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 IGHV1OR21-1A0A087WYE8 117 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 IGLV3-32A0A0A0MS00 114 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 IGHV1OR15-9A0A0B4J2B8 117 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 A0A1W2PR77 199 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 C9orf170A2RU37 121 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 DCDC2BA2VCK2 349 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 C5orf51A6NDU8 294 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 MPTX1A8MV57 137 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 H7C1C5 153 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 DCTN6O00399 190 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 TSPAN4O14817 238 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 LINC01565O15544 149 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 TPD52L2O43399 206 aaKnown RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 DNPH1O43598 174 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 SNAPINO95295 136 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 HPP00738 406 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 PLGP00747 810 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 IFNA21P01568 189 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 HOXD4P09016 255 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 VSIG10L2P0DP72 767 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 CTLA4P16410 223 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF43P17038 809 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 CTRB1P17538 263 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 FPR2P25090 351 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF133P52736 654 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 EMP2P54851 167 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 NXPH1P58417 271 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 PPP1CAP62136 330 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 LSM6P62312 80 aaKnown RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 LCN6P62502 163 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 GABREP78334 506 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 SLC35A1P78382 337 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 POU3F1Q03052 451 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ECH1Q13011 328 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 OR7A5Q15622 319 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF239Q16600 458 aaKnown RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 GXYLT1Q4G148 440 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF542PQ5EBM4 170 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ATPAF1Q5TC12 328 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF660Q6AZW8 331 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 CTRB2Q6GPI1 263 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF813Q6ZN06 617 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 MDGA2Q7Z553 956 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 FJX1Q86VR8 437 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 COMMD2Q86X83 199 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 C9orf40Q8IXQ3 194 aa6.82□□□□□ -1.32
ATXN3-250ENST00000568290 GTPBP8Q8N3Z3 284 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-250ENST00000568290 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms