RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 B9A039 149 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 H7C1C5 153 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF701M0R085 212 aaPredicted RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 CTLA4P16410 223 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF14P17017 642 aaPredicted RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 WNT4P56705 351 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 SNRPD2P62316 118 aaKnown RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 LCN6P62502 163 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 BDH1Q02338 343 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 PLP2Q04941 152 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 MRPL28Q13084 256 aaKnown RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 GALEQ14376 348 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 SHFQ7M4L6 423 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 KCTD20Q7Z5Y7 419 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 SKA3Q8IX90 412 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 OR10H4Q8NGA5 316 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 OR13F1Q8NGS4 319 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 ASB17Q8WXJ9 295 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 NMD3Q96D46 503 aaKnown RBP11.62□□□□□ -0.55
CLK3-218ENST00000566926 INTS14Q96SY0 518 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 BCL7BQ9BQE9 202 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF442Q9H7R0 627 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 SIAEQ9HAT2 523 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF224Q9NZL3 707 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 H7C417 338 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 NOL3O60936 208 aaKnown RBP11.61□□□□□ -0.55
CLK3-218ENST00000566926 HLA-DQA2P01906 255 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SERPINA5P05154 406 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 CELA3BP08861 270 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 LIMS3P0CW19 117 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 LIMS4P0CW20 117 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 ZNF823P16415 610 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 PSMB9P28065 219 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 CALCRP30988 508 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 PYCR1P32322 319 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SERPINF1P36955 418 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 MAP2K4P45985 399 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 TAS2R43P59537 309 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 GALK2Q01415 458 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 ACSM1Q08AH1 577 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
CLK3-218ENST00000566926 RAB39AQ14964 217 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 MED22Q15528 200 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 TIGD6Q17RP2 521 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 TEX30Q5JUR7 227 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SLC25A47Q6Q0C1 308 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 BIVMQ86UB2 503 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SATL1Q86VE3 508 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SLC35F2Q8IXU6 374 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 TIGD4Q8IY51 512 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SYS1Q8N2H4 156 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 OR51L1Q8NGJ5 315 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 OR1J2Q8NGS2 313 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 FBXO17Q96EF6 278 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 ZNF75AQ96N20 296 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 SH3GL3Q99963 347 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 WDR76Q9H967 626 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 NOX3Q9HBY0 568 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 DLL4Q9NR61 685 aa11.61□□□□□ -0.55
CLK3-218ENST00000566926 LSM2Q9Y333 95 aaKnown RBP11.61□□□□□ -0.55
CLK3-218ENST00000566926 IQCMA0A1B0GVH7 501 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ZNF670-ZNF695F2Z2N8 137 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 DCTN6O00399 190 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 MT-ND5P03915 603 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 SCG5P05408 212 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 INHBBP09529 407 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 OR4A8P0C604 315 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 NR4A1P22736 598 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ENTPD1P49961 510 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ETV1P50549 477 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 RPS23P62266 143 aaKnown RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 HGFACQ04756 655 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 EGR3Q06889 387 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 EFNB3Q15768 340 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 SGCAQ16586 387 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 TIMM50Q3ZCQ8 353 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 VHLLQ6RSH7 139 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ZNF322Q6U7Q0 402 aaPredicted RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 MYPOPQ86VE0 399 aaPredicted RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 ERI1Q8IV48 349 aaKnown RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 SLC26A10Q8NG04 563 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 NSMAFQ92636 917 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 DGCR14Q96DF8 476 aaKnown RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 TSSK2Q96PF2 358 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 MGLLQ99685 303 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 WACQ9BTA9 647 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ALG8Q9BVK2 526 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 RERGLQ9H628 205 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 CMAHPQ9Y471 501 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 MTORP42345 2549 aa11.6□□□□□ -0.55
CLK3-218ENST00000566926 ZNF469Q96JG9 3925 aaPredicted RBP11.6□□□□□ -0.55
CLK3-218ENST00000566926 VPS13CQ709C8 3753 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 A0A1W2PQL4 384 aaPredicted RBP11.59□□□□□ -0.55
CLK3-218ENST00000566926 H7C1Q1 480 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms