RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 NME2P1O60361 137 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 LIMS3P0CW19 117 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 LIMS4P0CW20 117 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 NME2P22392 152 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 PSMA1P25786 263 aaKnown RBP15.76■□□□□ 0.11
GDE1-203ENST00000564172 SDC2P34741 201 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 ACVR1BP36896 505 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 ARG2P78540 354 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 SPHARQ15513 63 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 FTMTQ8N4E7 242 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 EXD3Q8N9H8 876 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 ZNF519Q8TB69 540 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 TSSK2Q96PF2 358 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 ZNF649Q9BS31 505 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 ACTR6Q9GZN1 396 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 PLEKHB1Q9UF11 243 aaPredicted RBP15.76■□□□□ 0.11
GDE1-203ENST00000564172 WASF3Q9UPY6 502 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 KLF13Q9Y2Y9 288 aaPredicted RBP15.76■□□□□ 0.11
GDE1-203ENST00000564172 FREM3P0C091 2139 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 TMEM238LA0A1B0GVL6 79 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 H7C1C5 153 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 KLK10O43240 276 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 HRGP04196 525 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 SBK2P0C263 348 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 INPP1P49441 399 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 SLC25A1P53007 311 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 LCN6P62502 163 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 WIPI1Q5MNZ9 446 aaPredicted RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 RBMS3Q6XE24 437 aaKnown RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 PXKQ7Z7A4 578 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 ADPRHL1Q8NDY3 354 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 SMPDL3BQ92485 455 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 ZMYND19Q96E35 227 aaPredicted RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 JAM3Q9BX67 310 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 ADGRL4Q9HBW9 690 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 AKAP13Q12802 2813 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 XKRYO14609 159 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 TLX3O43711 291 aaPredicted RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 PMS2P2O95744 297 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 CD46P15529 392 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 APEX1P27695 318 aaKnown RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 AGFG1P52594 562 aaKnown RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 RAG2P55895 527 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 SLC35A1P78382 337 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 SLC35D3Q5M8T2 416 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 TMEM17Q86X19 198 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 ACBD7Q8N6N7 88 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 OR1S1Q8NH92 325 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 ZNF703Q9H7S9 590 aaPredicted RBP15.75■□□□□ 0.11
GDE1-203ENST00000564172 B3GAT1Q9P2W7 334 aa15.75■□□□□ 0.11
GDE1-203ENST00000564172 A0A1W2PNV4 684 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 TMEM129A0AVI4 362 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 NPIPB13A6NJU9 1138 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 ZNF814B7Z6K7 855 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 NPIPB4C9JG80 1138 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 DCTN6O00399 190 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 RENP00797 406 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 MRPL3P09001 348 aaKnown RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 IFNGR1P15260 489 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 MUC1P15941 1255 aaPredicted RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 RAB5BP61020 215 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 HSF1Q00613 529 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 POU3F1Q03052 451 aaPredicted RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 MELKQ14680 651 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 LINC01590Q5TEZ4 76 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 OR2G6Q5TZ20 316 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 SSX3Q99909 188 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 TTTY12Q9BZ98 90 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 SYT4Q9H2B2 425 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 SRA1Q9HD15 236 aaKnown RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 B4GALT7Q9UBV7 327 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 LOC400499M0QZD8 3231 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 NCKAP5O14513 1909 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 A0A0J9YW62 118 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 PRSS37A4D1T9 235 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 KLRC4-KLRK1H3BQV0 150 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 GPR171O14626 319 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 HEXAP06865 529 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 CXCL3P19876 107 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 CRYBB2P43320 205 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 POU4F2Q12837 409 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 ZNF239Q16600 458 aaKnown RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 NHLRC1Q6VVB1 395 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 SLC35D2Q76EJ3 337 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 FGD2Q7Z6J4 655 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 OR6V1Q8N148 313 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 AKR7LQ8NHP1 331 aa15.74■□□□□ 0.11
GDE1-203ENST00000564172 EXOSC4Q9NPD3 245 aaKnown RBP15.74■□□□□ 0.11
GDE1-203ENST00000564172 GJE1A6NN92 205 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 GLCEO94923 617 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 KDM4BO94953 1096 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 PYCR1P32322 319 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 MEOX1P50221 254 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 WNT4P56705 351 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 SNRPEP62304 92 aaKnown RBP15.73■□□□□ 0.11
GDE1-203ENST00000564172 H3F3AP84243 136 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 C1DQ13901 141 aaKnown RBP15.73■□□□□ 0.11
GDE1-203ENST00000564172 GGTLC2Q14390 218 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 BCL2L15Q5TBC7 163 aa15.73■□□□□ 0.11
GDE1-203ENST00000564172 TMEM225Q6GV28 225 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms